Pseudomonas plecoglossicida: RK21_00260
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Entry
RK21_00260 CDS
T03646
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj01501
beta-Lactam resistance
ppj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RK21_00260
01503 Cationic antimicrobial peptide (CAMP) resistance
RK21_00260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppj03036
]
RK21_00260
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_00260
01504 Antimicrobial resistance genes [BR:
ppj01504
]
RK21_00260
Chromosome and associated proteins [BR:
ppj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RK21_00260
Transporters [BR:
ppj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RK21_00260
Antimicrobial resistance genes [BR:
ppj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RK21_00260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
Biotin_lipoyl_2
HlyD_3
Motif
Other DBs
NCBI-ProteinID:
AJG11768
UniProt:
A0A099N3I7
LinkDB
All DBs
Position
complement(271330..272484)
Genome browser
AA seq
384 aa
AA seq
DB search
MQFKPAVTALVSAVALATLLSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSELPGRTTAY
RVAEVRPQVNGIILKRLFKEGSEVKEGQQLYQIDPAVYEANLANAQANLQATRSLAERYK
QLIDEQAVSKQEYDDANAKRLQAEASLKSAQIDLRYTKVLAPISGRIGRSSFTEGALVSN
GQANAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAASVQLVLEDGSLFKQ
EGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRD
LKGAPTALVVNQENKVELRQLKANRTLGSDWLIEEGLNPGDRLITEGLQYVRPGVEVKVS
EATNVKKPASPVQANAAKADAKAE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagccgttaccgctctggtttccgccgtcgccctggcaaccctgctc
agtggctgtaagaaagaagaagcagcgccagcggcgcaggctcctcaggtcggcgtcgtg
accatccagccccaagccttcaccctgacctcggaattgccggggcgtaccactgcctac
cgcgtcgccgaagtgcgcccgcaggtcaacggcatcatcctcaagcgcctgttcaaggaa
ggcagtgaggtcaaggaaggccagcagctgtaccagatcgaccctgccgtgtacgaagcc
aacctggccaatgcccaggccaacctgcaggccacccgctcgctggccgagcgctacaag
cagctgatcgacgaacaggctgtctccaagcaggaatacgacgacgccaatgccaaacga
ttgcaggccgaggcttcgctcaaaagcgcgcagatcgacctgcgctacaccaaggtcctg
gcaccgatcagcggccgtatcggccgttcttcgttcaccgaaggtgcactggtgagcaat
ggccaggccaacgccatggccaccatccagcaactcgacccgatctacgtcgacgtcacc
cagtccaccgccgaactcctcaagctgcgccgtgacctggaaagcggccagctgcagaag
gccggcgacaacgccgcctcggtgcagctggtgctggaagacggcagcctgttcaagcag
gaaggccgcctggagttctccgaagtcgcggtcgacgagaccaccggctcggtcaccctg
cgcgccctcttccccaaccccgaccacaccctgctgccaggcatgttcgtgcatgcgcgg
ctcaaggccggggtcaacgccaacgccatcctggccccgcaacagggcgtgacccgcgac
ctgaaaggcgcaccgaccgcgctggtggtcaaccaggagaacaaggtcgaactgcgccag
ctcaaggccaaccgtaccctgggcagcgattggctgatcgaggaaggcctgaacccgggt
gaccgcctgatcaccgaagggctgcagtacgtgcgcccgggcgtcgaggtcaaggtcagc
gaagccaccaacgtcaagaagccggccagccctgttcaggccaacgcggcgaaagcagac
gccaaagcggagtaa
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integrated database retrieval system
