Pseudomonas plecoglossicida: RK21_02985
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Entry
RK21_02985 CDS
T03646
Name
(GenBank) RND efflux system, outer membrane lipoprotein CmeC
KO
K18300
outer membrane protein, multidrug efflux system
Organism
ppj
Pseudomonas plecoglossicida
Module
ppj_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_02985
01504 Antimicrobial resistance genes [BR:
ppj01504
]
RK21_02985
Transporters [BR:
ppj02000
]
Other transporters
Pores ion channels [TC:
1
]
RK21_02985
Antimicrobial resistance genes [BR:
ppj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
RK21_02985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AJG14493
LinkDB
All DBs
Position
3130255..3131784
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AA seq
509 aa
AA seq
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MPHLVLLPLVALTLAACAVGPNYKAPAAPQAVTYARQDPVAVSQLVPEADAQFWRELDDP
VLHSLVENALHANHDIRIALSRYEQASALSRERRQDYYPTLGASGEISTQRASAAQAPDA
SRSDRDNDLHSAGLSVIWELDFFGRVRRSVESQRAETEASAADLAGVQVAMVAELTDAYF
RLRGLQVQLQVARDNEINQAETLRLIEVLFENGRGTSFDADRARTQLALTRSRIPPLEAE
AAVAAHRIAVLTGRTPAAMAEVLDHPAALPELPAQINAGAPGDLLRRRPDVAAAERRLAA
ATARIGVAMADLFPRFTLGGLIGTQALGFGSLFERDSETRMISLGVGGSFLDVGRVRSRI
AAANSATAENLAVYERTVLRAMEETENALVRLSRAQTENAMLVQATEASRRAAKTARLQF
EGGAIHVLDVLEAERSRLESEDLLAQSATRRATALVAVYKTLAGGWSHALPGPQGEAVAQ
RHKSGDRPELDELGEMSGYNAATLKRPLY
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgccacatctggtactgctccctttggtggcgttgacgctggcagcttgcgcagtaggg
ccgaattacaaggcacctgccgcgccccaggcagtgacgtatgcccgccaagaccccgtt
gccgtgtcccagcttgtaccggaggccgatgcgcaattctggcgggaactggatgacccg
gtgctgcactctttggtggagaatgctcttcacgccaatcacgacatccgcatagcactg
tcgcgctacgagcaagccagcgcactgtcgcgcgaacgtcgccaagactactatccgacg
ctgggcgcgtccggtgaaatcagtacccagcgcgccagtgctgcacaagcaccggatgcg
tcccgctccgaccgggataacgatctgcattcggctggcctatccgtgatctgggaattg
gacttctttggccgagtgcggcgcagcgtggaatcgcagcgcgccgagaccgaggccagc
gcagccgacctggcgggcgtacaagtggctatggtggccgagttgaccgacgcctatttc
cgcttgcgcggcttgcaagtgcaattacaggtcgcgcgggacaacgaaatcaaccaagcc
gaaacgctgcggctgatcgaggtcttgttcgagaacggccggggcacgtcgttcgatgcc
gaccgcgcccgcacgcaattggcgctgacacgctcgcgcattccgccgcttgaagctgag
gctgctgtggccgcccaccgcattgccgtgctcactggccgcacgcctgcggcgatggcc
gaagtgctggatcaccccgcagccttgcctgagctgcccgcccagatcaacgccggtgca
ccgggcgatctactgcgtcgccgtcccgatgtggctgcggcagaacgtaggctggctgcg
gccactgcgcgtatcggcgtagccatggcagacctgttccctcgctttacgttgggaggg
ctgatcggcacgcaggcgttgggctttggttcgttgttcgagcgtgatagtgaaacgcga
atgatctcgctcggtgtgggtggttccttcctagacgtgggccgggtgcggtcgcgcatc
gcggcggccaattcagccactgccgaaaacttggcggtatacgagcgcacggtgctgcgc
gccatggaagaaaccgagaacgcgctggtacgcctatcgcgcgcgcagaccgagaacgcc
atgctggtacaggcgaccgaggccagccgtcgggcagccaagacggctcgcctgcaattt
gagggcggcgccatccatgttttggatgtgctggaggccgaacgttcacgcttggagtcc
gaagacttgctggcacaaagcgccacccgcagggcgacggcgttggtggcggtctacaag
acgctggccggcggctggtcacacgccttgcccggaccgcagggcgaggcagtcgcgcag
cgccacaaaagcggcgacaggcctgaactggatgaactcggtgagatgagcggctacaac
gctgcgactctcaaacggcctttgtactga
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