KEGG   Pseudomonas plecoglossicida: RK21_03065
Entry
RK21_03065        CDS       T03646                                 
Name
(GenBank) B12-dependent methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ppj  Pseudomonas plecoglossicida
Pathway
ppj00270  Cysteine and methionine metabolism
ppj00450  Selenocompound metabolism
ppj00670  One carbon pool by folate
ppj01100  Metabolic pathways
ppj01110  Biosynthesis of secondary metabolites
ppj01230  Biosynthesis of amino acids
ppj04980  Cobalamin transport and metabolism
ppj04981  Folate transport and metabolism
Module
ppj_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:ppj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    RK21_03065
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    RK21_03065
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    RK21_03065
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    RK21_03065
   04980 Cobalamin transport and metabolism
    RK21_03065
Enzymes [BR:ppj01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     RK21_03065
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding CdhD MtrH
Other DBs
NCBI-ProteinID: AJG14573
LinkDB
Position
3212794..3216501
AA seq 1235 aa
MSDRSARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLL
LSRPDVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADA
KTLETPHKPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVTNYIEATRGLIEGGADL
LLIETIFDTLNAKAAIFAVQQVFEEDGIELPIMISGTITDASGRTLSGQTTEAFWNSVRH
AKPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAVVVEE
FAASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLFV
NVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYG
AAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
YAVDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIV
NAGQLEIYDEIPPALREKVEDVVLNRTPHGTDALLAIADDYKGGGATREVENEEWRSLPV
EKRLEHALVKGITAFIVEDTEECRQQCARPIEVIEGPLMNGMNVVGDLFGAGKMFLPQVV
KSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQTARDEKCDIIGLSGLITPSLDEMVHVAREMQRQGFQLPLMIGGATTS
KAHTAVKIEPKYSNDAVVYVTDASRAVGVATQLLSKELKAGFVEKTRQEYEEVRERTANR
SARTERLSYAQAIAAKPQYDWAGYQPAVPSFTGVKVLEDIDLRTLAEYIDWTPFFISWDL
AGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVADDDIEVYG
EDGQALATLHHLRQQTIKPDGKPNWSLADFVAPKASGVTDYVGGFITTAGIGAEEVAKAY
QDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIKEQYRGIRPA
PGYPACPDHTEKETLFRLLDGTAIGETGPSGVFLTDHFAMFPAAAVSGWYFAHPQAQYFA
VGKVDKDQIERYSARKGQDVSVSERWLAPNLGYDS
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgtccgaccgcagcgctcgtctccaagcactccagaacgcactcaaggagcgcatcctg
atcctcgacggcggcatgggtactatgatccaaagctaccggctcgaggaacacgactat
cgtggcacgcgtttcgccgattggccaagcgatgtcaaaggtaacaacgacctgttgctg
ctcagccgcccggatgtgatcgccgccatcgaaaaggcctacctggatgccggcgccgat
atcctcgaaaccaacaccttcaacgccacgcagatttcccaggccgactacggcatggaa
tcgctggtctacgagctgaacgtcgagggcgcgcgcatcgcccgccaggtggccgatgcc
aagaccctggaaaccccgcacaagccgcgcttcgtcgctggcgtgctcggccctaccagc
cgcacctgctcgatttccccggacgtcaacgacccaggctaccgcaacgtcactttcgat
gagctggtaacgaactacatcgaggccacccgcggcctgatcgagggcggcgccgacctg
ctgctgatcgagaccatcttcgacaccctcaacgccaaggcggcgatcttcgccgtgcag
caggtgttcgaggaagacggcatcgaactgccgatcatgatctccggcaccatcaccgac
gcctcgggccgtaccctgtcgggccagactaccgaagcgttctggaactcggtacgccac
gccaagccgatttccgtgggcctgaactgcgccctcggcgccaaggacctgcgcccgtac
ctggaagagctggcgaccaaggccgacacccatgtctcggcccaccccaacgccggcctg
ccaaacgcctttggtgaatacgacgaaaccccggccgaaatggccgtggtggtcgaggaa
ttcgccgccagcggcttcctcaacatcatcggcggctgctgcggcaccacgccgggccac
atccaggccattgccgaggccgtggccaagtacaagccgcgcgagattccggaaatcgcc
aaggcctgccgcctgtcgggcctggagccgttcaccatcgaccgccagtcgctgttcgtc
aacgtcggcgagcgcaccaacatcacgggctctgccaagttcgcccggctgatccgtgaa
gagaactacaccgaagccctggaagtcgccctgcagcaggtcgaggccggcgcccaggtg
atcgacatcaacatggacgaagggatgctcgactcccaggccgccatggtccgcttcctt
aacctgatcgccggcgagccggacatctcgcgcgtgccgatcatgatcgactcgtccaag
tgggaagtgatcgaagcgggcctcaagtgcattcagggcaagggcatcgtcaactccatt
tccatgaaggaaggcgtcgagcagttcaagcaccacgcccgcctgtgcaagcgctatggc
gctgccgtagtggtgatggcctttgacgaagtcggccaggccgacacggccgcgcgcaag
aaagagatctgccaacgcagttacgacatcctggtcaatgaagtgggcttcccgccggaa
gacatcatcttcgacccgaacattttcgccgtcgccaccggcatcgaagagcacaacaac
tacgccgtcgatttcatcgaggcctgcgcctacatccgcgaccacctgccgcacgccctg
agctcgggcggtgtgtccaacgtgtcgttctcgttccgtggcaacaacccggtgcgggaa
gccatccactcggtgttcctgtaccacgcgatccagaacggcctgaccatgggtatcgtc
aacgccggccagctggagatctacgacgagatcccgcctgccctgcgtgaaaaggtcgag
gacgtggtgctcaaccgcaccccgcatggcaccgacgcactgctggccattgccgacgac
tacaagggcggcggcgcaaccagggaagtggaaaacgaagagtggcgctcgctgccggtg
gaaaaacgcctggagcacgcgctggtcaagggcattaccgcgttcatcgtcgaagacacc
gaggaatgccgccagcagtgcgcccgcccgatcgaagtgatcgaaggcccgctgatgaat
ggcatgaacgtggtcggcgacctgttcggcgcgggcaagatgttcctgccccaggtggtc
aagtcggcccgcgtgatgaaacaggcggtagcgcacctgattccgttcatcgaagccgag
aaaggcgacaagccggaagccaagggcaagatcctgatggccacagtaaaaggcgacgtg
cacgacatcggcaagaacatcgtcggcgtggtgctgggctgcaacggctacgacatcgtc
gacctcggcgtgatggtgccggccgagaagatcctgcaaaccgcccgcgacgagaagtgc
gacatcatcggcctgtccggcctgatcacgccgtcgctggacgagatggtccacgtggcc
cgcgaaatgcagcgccagggcttccagttgccgctgatgatcggcggcgccaccacctcc
aaggcgcacaccgcagtcaagatcgagcccaagtacagcaacgacgccgtggtctacgtc
accgacgcctcgcgcgcggtaggtgttgccacccagttgctgtccaaggagctgaaagcc
ggcttcgtcgagaagacccgccaggaatacgaagaagtacgcgagcgcaccgccaaccgc
agtgcccgcaccgagcgcctgagctacgcccaggctatcgccgccaagccgcagtacgac
tgggctggctaccagccagcggtgccctccttcaccggcgtcaaggtgctggaagacatc
gacctgcgcacgctggccgagtacatcgactggaccccgttcttcatctcctgggacctg
gccggcaagttcccgcgcatcctcaccgacgaagtggtcggcgaagcggcgacggcgctt
tacaaagatgcccgcgagatgctcgacaaactgatcgacgaaaaactcatcagcgcccgc
gcagtgttcggcttctggccggccaaccaggtagccgatgacgatatcgaagtgtacggc
gaggacggccaggccctggctaccctgcaccacctgcgccagcagaccatcaagccggac
ggcaagcccaactggtcgctggccgacttcgtcgcgccgaaggccagtggcgttaccgac
tacgtgggcggtttcatcactaccgccggcatcggtgccgaggaagtggccaaggcctac
caggacaagggcgacgactacagttcgatcatggtcaaggccctggccgaccgcctggcc
gaggcctgtgccgaatggctgcacgagcaggtgcgtaaagagcactggggttatgcccgc
gacgaacacctcgacaacgaggcgctgatcaaggagcagtaccgcggtattcgcccggcc
cccggctacccggcctgcccggaccacaccgagaaggaaaccctgttccgcctgcttgat
ggcactgccatcggtgagaccgggccgagcggcgtgttcctcaccgaccactttgcgatg
ttcccggcggcggcggtcagcggctggtactttgcccacccgcaggcgcagtactttgcg
gtgggcaaggtcgacaaggaccagatcgagcgctacagcgcgcgcaagggccaggatgtg
agcgtcagcgagcgctggttggcgcctaacctgggttacgacagctaa

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