Pseudomonas plecoglossicida: RK21_03356
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Entry
RK21_03356 CDS
T03646
Name
(GenBank) glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00220
Arginine biosynthesis
ppj00250
Alanine, aspartate and glutamate metabolism
ppj00430
Taurine and hypotaurine metabolism
ppj00910
Nitrogen metabolism
ppj01100
Metabolic pathways
ppj01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RK21_03356
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RK21_03356
00220 Arginine biosynthesis
RK21_03356
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
RK21_03356
Enzymes [BR:
ppj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
RK21_03356
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
AJG14864
LinkDB
All DBs
Position
complement(3519518..3524383)
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AA seq
1621 aa
AA seq
DB search
MAFFTAASKADFQHQLQAALAQHISEQSLPQVALFAEQFFGIISLDELTQRRLSDLAGCT
LSAWRIIERFDPEYPQVRVYNPDYERNGWQSTHSVVEVLHHDLPFLVDSVRTELNRRGYS
IHTLQTTVLSVRRGAKGELLELLPKGTQGEGVRHESLMYLEIDRCANAAELTVLAREIEQ
VLAEVRVVVADFEPMKAKLREVVAEVEQTAFGPAQNEKGEVKAFLEWLLDNHFTFLGYEE
FTVKGDADGGQMVYDEQSFLGLPRRLRVGLTSDELRIEDYAVAYLNEPLLLSFAKAALPS
RVHRPAYPDYVSIRQLDANGKVIKEHRFMGLYTSSVYGESVHAIPYIRQKVTEVERRSGF
DPKAHLGKELAQVLEVLPRDDLFQTPVDELFSTVMSIVQIQERNKIRVFLRKDPYGRFCY
CLAYVPREIYSTEVRQKIQQVLMERLKASDCEFWTFFSESVLARVQLILRVDPKNRIDID
PQQLEREVIQACRSWHDDYSALVIENFGEAQGTNILADFPKGFPAGYRERFAAHSAVVDL
QHVLNLSESKPLAMSFYQPLTQVGERTLHCKLYHADTPLALSDVLPILENLGLRVLGEFP
YRLRHASGRGYWIHDFAFTYSEGLSLDIQQLNDTLQDAFIHIVRGDAENDAFNRLVLTAG
LPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTQED
LDDKQLRLEQAILTALDDVQVLNEDRILRRYLDLIKATLRTNFYQPDANGHNKSYFSFKF
NPKLIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQQ
VKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGVACYRIFISGLLDITDNLKDGGVVPPA
NVVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAR
GAWVGVQRHFRERGINVQEDPITVIGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDP
NPEPASSFAERKRLFDLPRSAWSDYDTSIMSEGGGIFPRSAKSIAISPQMKERFAIEADR
LTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGEG
GNLGMTQLGRVEFGLHGGATNTDFIDNAGGVDCSDHEVNIKILLNEVVQGGDMTEKQRNQ
LLGSMTDEVAGLVLGNNYKQTQALSLAARRARERIAEYKRLMADLEARGKLDRAIEFLPS
EEQLAERLAAGQGLTRAELSVLISYSKIDLKEQLLKSLVPDDDYLTRDMETAFPPSLVSK
FAESMRRHRLKREIVSTQIANDLVNNMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLP
HWFRQIEALDYQVPAEIQLTLMDELMRLGRRATRWFLRSRRNEQDAGRDTAHFGPKIAQL
GLKLDELLEGPTRERWMVRYQGFVEAGVPELLARMVAGTTHLYTLLPIIEASDVTGHDPA
QVAKAFFAVGSALDLTWYLQEISNLPVENNWQALAREAFRDDIDLQQRAITISVLQMADA
PQDMDARVALWAEQHRGMVERWRAMLDDLRNATGTDYAMYAVANRELVDLAMSGQAAVVP
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcagccagcaaagccgacttccagcatcaactgcaagcggccctg
gcgcagcacatcagcgaacagtccctaccacaagttgcgctgttcgccgagcagttcttc
ggcatcatctctctggacgaactcacccaacgcaggctttccgacctggccggctgcacc
ctgtcagcctggcgcatcatcgagcgtttcgaccccgaatacccgcaagtacgggtgtac
aaccccgattacgagcgtaatggctggcaatcgacccacagcgtggtcgaagtgctgcac
cacgacctgccgttcctggtcgactcggtacgcaccgagctcaaccgccgcggctacagc
atccacaccctgcagaccaccgtgctcagcgtgcgccgcggcgccaagggcgagctgctt
gaactgctgcccaagggcacccaaggcgagggcgtacgccatgagtcgctgatgtacctg
gagatcgaccgttgcgccaacgccgccgagctgacggtactggcccgcgagatcgagcag
gtgctggccgaggtgcgggtggtggtggccgacttcgaaccgatgaaggccaagctgcgt
gaagtggttgcggaggtggagcagaccgcctttggcccggcgcagaacgaaaagggcgag
gtcaaggctttcctcgagtggctgctggacaaccacttcaccttcctgggctatgaagaa
ttcaccgtcaagggcgacgccgatggcggccagatggtctacgacgagcagtcgttcctc
ggcctgccgcgccgcctgcgcgtgggcctgacgagcgacgagctgcgcatcgaagactac
gccgtggcctacctcaacgaaccgctgctgctgtcgttcgccaaggccgcgctgccaagc
cgcgtacaccgcccggcctacccggactacgtgtcgatccgccagctggacgccaatggc
aaggtgatcaaggagcaccgcttcatgggcctgtacacctcgtcggtgtacggcgaaagc
gtgcatgccatcccttatatccggcagaaggtcaccgaagtcgagcgccgctcgggcttc
gatcccaaggcccacctgggcaaggaactggcccaggtgctggaagtgctgccgcgcgac
gacctgttccagaccccggtcgacgagctgttcagcaccgtcatgtcgatcgtgcagatc
caggaacgcaacaagatccgcgtgttcctgcgcaaggacccatacggccgcttctgctac
tgcctggcctatgtaccgcgggaaatctactccactgaagtgcggcagaagatccagcag
gtgctgatggagcgcctgaaggccagcgactgcgagttctggaccttcttctccgaatcg
gtgctggcccgtgtgcagctgattttgcgggtagacccgaaaaaccgcatcgacatcgac
ccgcagcagctggaacgcgaagtgatccaggcctgccgctcgtggcatgacgactactcg
gcgctggtgatcgagaacttcggcgaagcccagggcaccaacatcctcgccgacttcccc
aaaggtttcccggccggctaccgcgagcgcttcgccgcgcactcggcggtggtcgacctg
cagcacgtgctgaacctgtcggaaagcaagccgctggcgatgagcttctaccagccattg
acccaggtcggggaacgcaccctgcactgcaagctgtaccacgccgacacgccgctggcg
ctttccgacgtgctgccgatcctggagaaccttggcctgcgcgtactcggcgagttcccg
taccgcctgcgccatgccagtggccgcggctactggatccacgacttcgccttcacctac
agcgaaggcctgagcctggacatccagcagctcaacgacaccctgcaggatgccttcatc
cacatcgtccgcggcgatgccgagaacgacgccttcaaccgcctggtgctgaccgccggt
ctgccatggcgcgacgtggcgctgctgcgcgcctacgcccgttacctgaagcagattcgc
ctgggcttcgacctgggttacatcgccagcaccctgaacaaccacaccgacatcgcccgc
gagctgacccggttgttcaagacccgcttctacctggcgcgcaagctcacccaggaagac
ctggatgacaagcaactgcgcctggagcaagccatcctgaccgcgctggacgacgtgcag
gtgctcaacgaagaccgcatcctgcgtcgctacctggacctgatcaaggccaccctgcgc
accaacttctaccagccggacgccaacggccacaacaagtcgtacttcagcttcaagttc
aaccccaagctgatccccgaactgcctaagccagtgcctaagttcgaaatcttcgtctac
tcgccacgggtcgaaggcgtgcacctgcgctttggcaacgtcgcccgcggcggcttgcgc
tggtccgaccgcgaggaagacttccgcaccgaagtgctaggcctggtgaaagcccagcag
gtcaagaactcggtcatcgtgccggtcggcgccaagggcggcttcctgccgcgccgcctg
ccgctgggcggcagccgtgacgagatcgccgccgaaggcgtggcgtgctaccgcatcttc
atttccggcctgctcgacatcaccgacaacctcaaggacggtggcgtggtgccgccggcc
aacgtggtacgccatgacgatgacgacccgtacctggtggtggcggccgacaagggcacc
gcgaccttctcggacatcgccaacggcatcgccatcgactacggcttctggctgggcgac
gccttcgcctcgggcggctcggccggttacgaccacaagaagatgggcattaccgcgcgc
ggcgcctgggtgggcgtgcagcgccacttccgcgagcgcggcatcaatgtgcaggaagac
ccgatcaccgtcattggcgtcggcgacatggccggcgacgtgttcggcaacggcctgctg
atgtccgacaagctgcaattggtggcggcgttcaaccacctgcacatcttcatcgacccg
aacccggagcctgcttccagctttgccgagcgcaagcgcctgttcgacctgccgcgctcg
gcctggagcgactacgacaccagcatcatgtccgaaggcggcggtatcttcccgcgcagt
gccaagagcatcgccatcagcccgcagatgaaagagcgcttcgccatcgaagctgatcgc
ctgaccccgaccgagctgctcaatgcgctgctcaaggcaccggtagacctgctgtggaac
ggtggcatcggtacctacgtcaaggccagcaccgagagccacgccgatgtcggcgacaag
gccaacgacgcgctgcgggtcaatggcaacgagctgcgctgcaaggtggtgggcgagggc
ggcaacctgggcatgacccagcttggccgggtcgagttcggcctgcatggcggcgccacc
aacaccgacttcatcgacaacgccggcggcgtggactgctccgaccacgaggtcaacatc
aagatcctgctcaacgaagtggtgcagggtggcgacatgaccgagaagcagcgcaaccag
ctgctgggcagcatgaccgacgaagtggccgggctggtgctgggcaacaactacaagcag
acccaggcgctgtcgctggcggcccgccgcgcccgcgagcggattgccgagtacaagcgc
ctgatggccgacctggaagcccgtggcaagctggaccgtgccatcgagttcctgccgtcc
gaagagcagttggccgagcgcctggccgccggtcagggcctgacccgcgccgagctgtcg
gtgctgatctcgtacagcaagatcgacctcaaggaacagctgctcaagtcgctggtgccg
gacgatgactacctgacccgcgacatggaaaccgctttcccgccgtcgctggtcagcaag
ttcgccgagtccatgcgccgccaccgcctgaagcgcgaaatcgtcagcacccagatcgcc
aacgacctggtcaacaacatgggcatcaccttcgtccagcgcctgaaggagtcgaccggc
atgagcccggccaacgtggccggggcctacgtgatcgtgcgcgacatcttccacctgccg
cactggttccgtcagatcgaggctctggactaccaggtgccggcggaaatccagctgacc
ctgatggacgagctgatgcgcctgggccgtcgtgccacccgctggttcctgcgcagccgc
cgcaacgagcaggacgccgggcgcgacaccgcgcacttcgggccgaagatcgcgcaactg
gggctcaagctcgacgagttgctcgaaggcccgacccgcgagcgctggatggtgcgctac
caaggcttcgtcgaggctggtgtgccggagttgctggcgcgcatggtggctggtactacc
cacctgtacaccctgttgccgatcatcgaggcttcggacgttaccggccatgacccggcg
caggtggccaaggcgttcttcgccgtgggcagcgcactggacctgacctggtacctgcag
gaaatcagcaacctgccggtggagaacaactggcaggcgctggcccgcgaggcgttccgc
gacgacatcgacctgcagcagcgggcgatcaccatctcggtactgcagatggccgatgca
ccgcaagacatggacgcccgcgtggcgctgtgggccgagcagcaccgggggatggtggag
cgctggcgcgccatgctggatgacctgcgcaatgcaacgggtaccgattatgcgatgtac
gcggtggccaaccgcgagctggtcgacctggccatgagcgggcaggcggcggtggtgccg
tcctga
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integrated database retrieval system