Pseudomonas plecoglossicida: RK21_04358
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Entry
RK21_04358 CDS
T03646
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj00020
Citrate cycle (TCA cycle)
ppj00270
Cysteine and methionine metabolism
ppj00620
Pyruvate metabolism
ppj00630
Glyoxylate and dicarboxylate metabolism
ppj00680
Methane metabolism
ppj00710
Carbon fixation by Calvin cycle
ppj00720
Other carbon fixation pathways
ppj01100
Metabolic pathways
ppj01110
Biosynthesis of secondary metabolites
ppj01120
Microbial metabolism in diverse environments
ppj01200
Carbon metabolism
Module
ppj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppj_M00012
Glyoxylate cycle
ppj_M00168
CAM (Crassulacean acid metabolism), dark
ppj_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RK21_04358
00620 Pyruvate metabolism
RK21_04358
00630 Glyoxylate and dicarboxylate metabolism
RK21_04358
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RK21_04358
00720 Other carbon fixation pathways
RK21_04358
00680 Methane metabolism
RK21_04358
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RK21_04358
Enzymes [BR:
ppj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
RK21_04358
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Cas_Cas2CT1978
Sacchrp_dh_NADP
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AJG15866
UniProt:
A0A099MSX8
LinkDB
All DBs
Position
complement(4560719..4561648)
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AA seq
309 aa
AA seq
DB search
MNKLTIVGAGMVGEAAAQIIAREELCRELVLMDVQGEMAQGKALDVWQAAVESGSDTRVH
GGAKAEMLDGSELVVITAGVPRKPGQSRQDVLSINLPILDGIMADIKLHAPTATVLVVSN
PVDVLTYRAWSLSGLGRTKVFGQAGVLDTARMKCFIAEQTGFSARDITALVLGGHGDSMV
PLMRYCQIGSVPLSHFLSSEQIEQIVERTRKGGGEILGLKKLGSACDAPGVAIAQMVDAI
ANGRNRILPAVAILEGEYGRTDIAMGVPCVLAEEGLARVIELPLDAQEQAMFDQSADQVA
RDIAEMKAL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaactgacaatcgtgggtgccggcatggtcggcgaggcggcagcgcagatcatc
gctcgggaagagttgtgccgtgagctggtgttgatggatgtgcagggcgagatggcgcaa
ggcaaagcgctggatgtgtggcaggcggcagtcgagtcgggttccgatacccgggttcac
ggcggggccaaggctgaaatgctggacggctctgaactggtggtcatcaccgcaggcgtg
ccgcgcaagccggggcagtcacgtcaggatgtactgagtatcaacctgccaatcctcgac
ggcatcatggccgacatcaagctgcatgcaccaactgcgacggtgctggtggtgtcgaac
ccggtcgatgtgctcacctatcgcgcctggagcctcagcgggctggggcgcaccaaggtg
ttcggccaggcgggggtgctggataccgcacgcatgaagtgtttcatcgccgagcagacc
gggttctctgcccgggatatcacggcgctggtcctgggcgggcatggcgacagcatggtg
ccgctgatgcgctactgccagatcggttcggtgccgttgtcgcacttcctgtccagtgag
cagatcgagcagatcgtcgagcgcacccgcaagggtggtggcgagatcctggggctgaag
aagctgggcagcgcctgcgatgcgccgggcgtggcgattgcgcagatggtcgatgcgatc
gccaacgggcgaaaccgcatcttgccggcggtggcgatcctggaaggcgagtacgggcgc
acggatattgccatgggtgtgccctgcgtactggcagaggaggggctggcgcgggtgatc
gagttgccgctggatgcgcaggagcaggcgatgtttgaccaatcggctgatcaggtggcg
cgggatattgctgaaatgaaggcgctgtaa
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