Pandoraea pnomenusa 3kgm: U875_01525
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Entry
U875_01525 CDS
T02936
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00300
Lysine biosynthesis
ppk00550
Peptidoglycan biosynthesis
ppk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U875_01525
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U875_01525
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppk01011
]
U875_01525
Enzymes [BR:
ppk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
U875_01525
Peptidoglycan biosynthesis and degradation proteins [BR:
ppk01011
]
Precursor biosynthesis
Amino acid ligase
U875_01525
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxK
Motif
Other DBs
NCBI-ProteinID:
AHB04227
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Position
324585..326123
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AA seq
512 aa
AA seq
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MIADAAQRAALAQAWDWLRRTVPAGANLHADSRRVMPGDVFVAYAVKGADSRGFIADAVE
RGAAAVVWQSDDFTWPASLASLGNVPQFGVPRLDWLAGPLAALWYGEPSVGMSMLGVTGT
NGKTSCSQWLAQLLSKAGTRSAVIGTLGSGFPGHLTVTGFTTPDAVQLQRSLADLRAQGA
AALAMEVSSHGLYQGRVNGVAFDIAVFTNLTQDHLDYHGTMAEYEAAKTRLFDWPGLKAA
VVNRDDAMGQRLLARLAGKTPVIEYGIHGDATSAHGNRVLRAEDIRATTSGTRFTLHVDD
RSQQITVPLIGEFNVSNALAVLGAALAGGVSQDAAIAGLAALAPVSGRMEQIGQPGQPLV
VVDYAHTPDALDKTLDALRPVATARGGKLVCVFGCGGDRDAGKRPQMGAVAERLADAVVL
TSDNPRTEVPAEIMAQIAAGLANPDAVRRIEDRASAILQAVRGAQAADVVLIAGKGHEST
QEIMGKKRPFSDQEHARLALAARATTVRGGGE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgacgccgcgcagcgcgccgcgctcgcgcaggcctgggactggctgcgccgc
acggtgccggccggggcgaacctgcacgcggacagccgccgcgtgatgccgggcgacgta
ttcgtcgcgtacgccgtcaagggcgccgacagccgtgggttcattgccgacgcggtcgag
cgcggcgctgccgcggtcgtctggcaaagcgacgacttcacatggccggcgtcgcttgcg
agtctcgggaatgtgccccagttcggcgtgcctcgcctcgactggctggccggtccgctg
gcggcgctgtggtacggcgagccgagcgtcggcatgtcgatgctcggtgtgaccggcacg
aacggcaagacgtcgtgcagccaatggctcgcgcaactgctgtccaaggcaggcacgcgc
agcgccgtgatcggcacgctcggcagcggctttccgggccatctgacggtgaccggtttc
accacgcccgacgccgtgcaactgcagcgcagcctggccgacctgcgcgcgcaaggcgcc
gccgcactcgccatggaagtgtcgtcgcacggcctgtatcaggggcgcgtcaacggcgtg
gcgttcgacattgccgtatttaccaatctgacgcaggaccacctcgattaccacggcacg
atggccgagtacgaggcagccaagacgcgcctgttcgactggccgggcctgaaggccgct
gtcgtcaatcgcgacgacgccatgggccagcgcctgctcgcgcgcctggccgggaagacg
ccggtcatcgaatacggcattcacggcgacgccacgtcggcacacggcaaccgcgtgctg
cgcgccgaggatattcgggcgacgacgtccggtacacgcttcacgctgcacgtcgacgac
cggagtcagcagatcacggtgccgctgatcggcgagttcaacgtgagcaatgcgctcgcc
gtgcttggcgcggcgcttgccggcggcgtatcgcaggacgccgcgatcgccgggctcgcc
gcgctcgcgccggtgtccgggcgcatggagcagatcgggcagccggggcaaccgctggtc
gtcgtcgactatgcgcacacgcccgacgcgctcgacaagacgctcgacgccctgcgtccg
gtggcgacggcgcgcggcggcaagctggtttgcgtgttcggctgcggcggcgaccgcgat
gcgggcaagcgtccgcagatgggcgcggtggccgagcgtctggccgacgcggtggtgctc
acgagcgacaacccgcggaccgaagtaccggccgagatcatggcgcagatcgccgccggt
ctcgcgaaccccgacgccgtgcgtcggatcgaagaccgcgccagcgcgatcctgcaggct
gttcgcggcgcgcaggcggccgacgtggtgctcatcgccggcaagggccacgaaagtaca
caggaaatcatgggcaagaagcggccgttctccgatcaggagcatgcgcgactggcactc
gccgcgcgcgcgacgactgtgcgcgggggaggtgaatga
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