Pandoraea pnomenusa 3kgm: U875_01890
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Entry
U875_01890 CDS
T02936
Name
(GenBank) 4-hyroxy-2-oxovalerate aldolase
KO
K18365
4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:
4.1.3.39
4.1.3.43
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00362
Benzoate degradation
ppk00621
Dioxin degradation
ppk00622
Xylene degradation
ppk00984
Steroid degradation
ppk01100
Metabolic pathways
ppk01120
Microbial metabolism in diverse environments
ppk01220
Degradation of aromatic compounds
Module
ppk_M00569
Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
U875_01890
00622 Xylene degradation
U875_01890
00621 Dioxin degradation
U875_01890
00984 Steroid degradation
U875_01890
Enzymes [BR:
ppk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.39 4-hydroxy-2-oxovalerate aldolase
U875_01890
4.1.3.43 4-hydroxy-2-oxohexanoate aldolase
U875_01890
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
DmpG_comm
Motif
Other DBs
NCBI-ProteinID:
AHB04287
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Position
complement(409222..410268)
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AA seq
348 aa
AA seq
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MNLQGKKITVHDMTLRDGMHPKRHLMTLEQMKSIACGLDAAGIPLIEVTHGDGLGGSSVN
YGFPAHSDEEYLGAVIPLMKQAKVSALLLPGIGTVDHLKMAKELGVHTIRVATHCTEADV
SEQHIALARKLEMDTVGFLMMAHMNSPEGLVRQAKLMESYGANCVYITDSAGYMLPDDVR
ASLGAVREALKPETELGFHGHHNLAMGIANSIAAVECGATRIDAASAGLGAGAGNTPMEV
LVAVCDRMGIQTGVDVWAIQDVAEDLVLPIMDFPIRIDRDSLTLGYAGVYGSFLLFAKRA
EQKYGVPAREILVELGRRGMVGGQEDMIEDTAITLAKARASKAQKVAA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaaggaaaaaaaatcaccgtccacgacatgacgttgcgtgacggcatgcat
ccgaagcgccacttgatgacgctggagcagatgaaaagcattgcctgcggcctggacgcg
gcggggatccccctgattgaagtcacgcacggcgatggcctgggcggctcgtcggtcaac
tatggctttccggcccacagcgatgaagaatatctgggggccgtgatcccgctcatgaag
caggccaaggtctcggctttactgttgccgggcatcggcaccgtcgatcatctgaagatg
gccaaggagcttggcgtgcacaccatccgggtggccacgcactgcaccgaggctgacgtg
tcggagcagcacatcgccctggcgcgcaagcttgagatggacacggtgggcttcctgatg
atggcgcatatgaacagtcctgaagggctggtcagacaggcaaagctgatggagtcatac
ggcgccaactgtgtctacattaccgattcggctggctacatgctgcccgatgatgtcagg
gccagccttggcgcggtgcgcgaggcgctcaagccggagacggaactgggctttcacggc
caccacaatctggcgatggggatcgccaactccattgcggccgttgagtgtggcgccacc
cgcatcgacgccgcctcggctggtctcggtgcgggtgcgggcaacacaccgatggaggtg
ctggtcgccgtatgcgaccgaatggggattcagaccggagtggatgtgtgggccattcag
gacgtggccgaagacctagtcctgccgatcatggacttccccatccggatcgaccgcgac
tcgctcaccctcggttacgccggggtctacgggtcgttcctgctgtttgccaagcgcgcc
gagcaaaagtatggcgtgccggcgcgcgagatcctggtcgagcttgggcgccggggcatg
gtcggtggccaggaagacatgattgaagacacggccatcacgctggccaaagcgcgtgcg
tcaaaggcgcagaaggtggcggcatga
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