Pandoraea pnomenusa 3kgm: U875_14925
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Entry
U875_14925 CDS
T02936
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
ppk
Pandoraea pnomenusa 3kgm
Pathway
ppk00020
Citrate cycle (TCA cycle)
ppk00270
Cysteine and methionine metabolism
ppk00620
Pyruvate metabolism
ppk00630
Glyoxylate and dicarboxylate metabolism
ppk00680
Methane metabolism
ppk00710
Carbon fixation by Calvin cycle
ppk00720
Other carbon fixation pathways
ppk01100
Metabolic pathways
ppk01110
Biosynthesis of secondary metabolites
ppk01120
Microbial metabolism in diverse environments
ppk01200
Carbon metabolism
Module
ppk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppk_M00012
Glyoxylate cycle
ppk_M00168
CAM (Crassulacean acid metabolism), dark
ppk_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
U875_14925
00620 Pyruvate metabolism
U875_14925
00630 Glyoxylate and dicarboxylate metabolism
U875_14925
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
U875_14925
00720 Other carbon fixation pathways
U875_14925
00680 Methane metabolism
U875_14925
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
U875_14925
Enzymes [BR:
ppk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
U875_14925
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Rv2466c-like
Motif
Other DBs
NCBI-ProteinID:
AHB06488
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All DBs
Position
3230797..3231780
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AA seq
327 aa
AA seq
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MAKPAMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELED
CAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLEANGAIFTVQGKALDEV
ASRNVKVLVVGNPANTNAYIAMKSAPNLPKENFTAMLRLDHNRALSQIAAKTGKPVASIE
KLAVWGNHSPTMYADYRFATIDGKSVKEMINDDVWNNDVFLPTVGKRGAAIIEARGLSSA
ASAANAAIDHIHDWVLGSNGKWVTMGIPSDGSYGIPEDVIYGVPVICENGKYKRVEGLEI
DAYSREKMDFTLKELEEERAGVAHLLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacccgcaatgcgtgtcgccgtcaccggcgccgctggccaaatcggctactcc
ctgctgttccgcatcgccaacggcgacatgctcggcaaggatcagcccgtcatcctgcaa
ctgctcgacctcccgcaagctcaagccgccgtcaagggcgtcgtgatggagctcgaggac
tgcgcgttcccgctgctcgccggcgtggtcgtgaccgacgacccgaaggtcgccttcaag
gatgccgacgtcgccctgctggttggtgcccgtccgcgctcgaagggcatggagcgcaag
gatctgctcgaagccaacggcgcgatcttcacggtgcagggcaaggcgctggacgaagtc
gccagccgcaacgtgaaggtgctggtggtcggcaacccggccaacaccaacgcctacatc
gccatgaaatcggcgccgaacctgccgaaggaaaacttcaccgcgatgctgcgcctggat
cacaaccgcgccctgtcgcagatcgccgcgaagaccggcaagccggtcgccagcatcgag
aagctggccgtgtggggcaaccactcgccgacgatgtacgccgactatcgcttcgccacg
atcgacggcaagagcgtcaaggaaatgatcaacgacgacgtgtggaacaacgacgtgttc
ctgccgaccgtcggcaagcgcggtgcggcgatcatcgaagcccgcgggctgtcgtcggcc
gcttcggctgccaacgccgccatcgaccacatccatgactgggtgctcggctcgaacggc
aagtgggtcacgatgggcattccgtcggacggctcgtacggcattccggaagacgtcatc
tatggcgtgccggtgatctgcgagaacggcaagtacaagcgcgtggaaggcctcgaaatc
gacgcctactcgcgcgaaaagatggacttcacgctcaaggagctcgaagaagagcgcgcc
ggcgtggcacatctgctgggctaa
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integrated database retrieval system