Postia placenta: POSPLDRAFT_96457
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Entry
POSPLDRAFT_96457 CDS
T01162
Name
(GenBank) predicted protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ppl
Postia placenta
Pathway
ppl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
POSPLDRAFT_96457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppl03400
]
POSPLDRAFT_96457
Enzymes [BR:
ppl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
POSPLDRAFT_96457
DNA repair and recombination proteins [BR:
ppl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
POSPLDRAFT_96457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
DUF4073
Motif
Other DBs
NCBI-ProteinID:
EED85575
JGI:
96457
LinkDB
All DBs
AA seq
980 aa
AA seq
DB search
MLPTPAPTSPPSSPRPEVTAAAEDHPIVYPPPPPTRGSAPFQVLAALFDKLQGERRPEKR
RRLLDSWFNKDRERAVYGLKEKNLAKIYIKLIPLNPRDPDAIRMLNWKRPTERNQSSGDF
PSVLYEVISKRSSVVEGTLTIHELNDHLDEISKNMGHSTTSEEQRWIARIILKDMQISVK
ETTVFAVFHPDAHALFNTCSDIKKIAWELWDPKRKLNDEVHLSPLRRIEDTVKEMQGSNF
IIEEKLDGERVQLHKRGNEYFYCSSSWATNRKGKDYTYLYGKHVGEGSLTPWIHKAFDAR
VDEIILDGEMLVWDPVSERNLPFGTLKTAALDRSKKERAPRPCFKIFDLLYLNGTPLLNK
SLKFRKRNLRACLKEVPGRMEFAVEYEGRTADDVRTRMEDIMASRGEGLVIKHPNSQYVL
SGRNSDWIKASCWTRGFNVKPEYMDSMGETVDVIVVAGNYGTGRRSGGVSTLVCAVVDDR
RPADEVEPKYSTFVRIGTGLSYADYIWVRQKPWKTWDPKNPPSFIQVAKKGSEDKGDVYL
EPQDSFLLKIKAAEITNSDLYHMGVTMRFPRAIQIREDLDTSDCTTATAVFESLRSDRKR
KMSDTDELSDCVNPKKKQRRTTKKPVILLPQYQSLKLEDVEVESDLFEGMTFMVSSDPKS
RTGEQDKKELLRMIRANGGKYVQMAKNNPDVLVVYGGTITPYDIKLIMNRDVCDIIKPQW
IRESVTKSERMPLTKRYFFHATSRRMEEDEYVQDDGSLEELALTDQHEEPLETNDKGDAT
QEDPSIADWFKVEKSSNRSEIQHDDTDSETEPDSDNDDVNRDEDIADEDDISDWVNVDNE
DSLKTEEDPVQDASESEPQVRMGETEEAREYDQELIFRHLCFYLDSPANAKKNSMSVKSK
NQDELNKGFEKLTTLITEHGGRVVDLDEPKLTHVVVDKRDLSLSSSRLAWTKKHCLMKMA
SAWQLALFLVLTPAPTEFAP
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctacgcctgcgccaacctcgccgccctcgtcaccacgtcctgaagtaacggcg
gcggcggaggatcacccaattgtctatcctccacctcctccgactagagggagcgcgcct
ttccaggtgctggctgctctcttcgataagcttcaaggcgagcgcagaccggagaagcgg
aggaggcttttagactcatggttcaacaaggaccgcgaacgtgcggtctatggtttgaag
gagaagaacctagcaaagatttatatcaaacttattcctcttaacccgagggatccggat
gcaattcgtatgcttaattggaagcgccctacagaaagaaatcaatcctcaggagacttc
ccttctgtattatatgaagtcattagcaagagatcatctgtggtggaagggacgttgacc
atccatgaactgaacgatcatctcgacgagatctcgaagaacatggggcactctaccaca
tctgaagaacagcgatggatagcacgcatcattttgaaagacatgcagatatcagtcaag
gagacgactgtcttcgccgtctttcatccagacgcgcatgctcttttcaatacatgttcc
gatatcaagaagattgcttgggaattatgggacccaaaacgtaaacttaacgatgaggtg
cacctatcgccgctccgacggattgaagatacagtaaaggaaatgcaaggtagcaacttt
atcatagaggagaagctcgatggcgagcgcgtgcaactgcataagcgcggaaacgagtac
ttctattgttctagctcatgggctacaaataggaaaggcaaagactacacttacctctac
ggaaaacatgtgggagaaggcagcttaacgccatggattcacaaggcattcgatgctcga
gtcgatgagatcattctcgatggcgaaatgctggtctgggatcctgtctctgagcggaat
cttccattcggtacattgaagaccgctgctcttgaccgatcgaagaaagagcgtgctcct
cgcccctgcttcaagatattcgatctcttgtacctgaacggcacgccccttctcaacaag
tcgctcaaattccgcaagcgcaatttacgggcctgtctgaaggaagtccctgggcgtatg
gagtttgcagttgaatacgagggccgcactgcggacgacgtgcgcactcgcatggaagat
atcatggcctctcgcggcgaaggtcttgttatcaagcaccccaactcgcagtacgtcctg
agtggtcgtaacagcgattggattaaggcaagttgttggactcgtggatttaacgtgaag
cctgagtacatggacagcatgggagaaacggtggatgtcatagtcgtcgccggaaactac
ggtactggccgacgttctggaggtgtctcgacactcgtatgcgctgtcgtcgacgatcgc
agacctgctgacgaggtagaaccaaagtatagcacctttgtgcgcataggaaccggtctt
tcatacgcggactacatatgggtacgacagaagccctggaagacttgggatccgaaaaac
cctcctagttttatacaagtcgcaaagaaagggtctgaggacaagggcgatgtgtatcta
gagccccaagattcctttctgctcaagattaaggctgccgaaatcactaactcagatcta
tatcatatgggcgtgacgatgcgctttccgcgtgcgattcagatccgggaggacctcgac
acttccgattgtacgactgcgaccgccgtttttgaaagtctgcggtcggataggaagagg
aaaatgagtgatactgatgagttgagtgattgtgtgaacccgaaaaagaagcagaggaga
accacgaagaagccggtaattcttctccctcagtaccagagcttaaagctagaggacgtc
gaggttgagagtgatcttttcgaggggatgaccttcatggtttcatccgatccaaaatcg
agaacgggcgaacaagataagaaagagctcctgcgaatgatccgtgccaatggaggcaag
tacgtccaaatggcaaagaacaaccctgatgtgcttgttgtatatggaggcacaatcact
ccttacgacattaagctcatcatgaacagggatgtctgcgacattatcaagccgcaatgg
atcagggaatctgtaacgaagagtgaacgaatgccgctgaccaagaggtacttcttccat
gccacttctcgtcgcatggaagaggacgaatacgttcaggatgatggaagcctcgaagag
ctggctctcacggatcagcatgaagagccccttgagaccaatgacaagggggatgcaact
caagaggatccctctatagcggattggttcaaagtcgagaagtcatcgaatagatctgag
atacagcacgacgatacggacagcgagacggaacctgattctgataatgatgatgtgaac
cgggatgaggacatagcagacgaggatgatatcagtgattgggtcaacgtggacaacgaa
gactcattgaaaaccgaagaagacccggtgcaggatgctagcgagtctgaacctcaagtc
cgcatgggggagaccgaggaggcccgggaatacgaccaggagctaatcttccgacatcta
tgcttctaccttgattcccctgcgaatgctaagaagaatagtatgtctgttaaaagcaag
aatcaagatgagctcaacaagggtttcgagaaattgacgacactgatcactgagcatggg
ggccgcgtcgtggaccttgatgaacccaagctcacgcatgtcgttgttgataagcgagac
ttgtcgctgagttcatccaggcttgcttggacgaagaaacattgcttgatgaagatggca
agtgcctggcaactcgctttgttccttgtgttaacgcctgctcccacagaattcgcgcca
tga
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integrated database retrieval system
