Postia placenta: POSPLDRAFT_99826
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Entry
POSPLDRAFT_99826 CDS
T01162
Name
(GenBank) predicted protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ppl
Postia placenta
Pathway
ppl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POSPLDRAFT_99826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppl03019
]
POSPLDRAFT_99826
Messenger RNA biogenesis [BR:
ppl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
POSPLDRAFT_99826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
RsgA_GTPase
AAA_15
AAA_23
ABC_ATPase
AAA_28
Zeta_toxin
PduV-EutP
SRP54
VapE-like_dom
MMR_HSR1
SMC_N
NACHT
AAA_33
AAA_18
FtsK_SpoIIIE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
EED81097
JGI:
99826
UniProt:
B8PDG5
LinkDB
All DBs
AA seq
294 aa
AA seq
DB search
MSIFGAEPNYEISIGGLTYKHSPIDSPSLSNVSMKLPKGSRTILVGANGAGKSTLLQILA
GKRLILQEDTHVHIKGRDVFRNSPPGVTFLGTEWAMNPVVRSDIVVHDFLNSVGGWRHKE
RRDKLLDILDVDLDWHMHAISDGERRRVQLVMGLMSDWDVLLLDEVTVDLDVLVRDDLLT
FLLTDSETRGVTILYATHIFDGLSRFPTHVAHMHLGTVLSQPTPWPLTPESAAQVVSVDL
GPNPPLYKLALQWLREDRELRRELEKQGRKTRGARIDEVPTDSETFYRKYDYSH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattcggcgcagagcctaactacgagatttctataggggggttgacctacaaa
cactcaccgattgactcgccgtcactctccaatgtttccatgaaattgccgaagggctcg
cgcacgatccttgtaggtgcaaatggagcgggaaaatcgactctgttgcaaatattggcc
ggcaagcgtctcattctccaagaggacacgcatgtgcatatcaagggacgcgatgtgttt
cgcaattcgcccccaggagttaccttcctcgggacagagtgggcaatgaacccggtcgta
cggagcgacatcgtcgtgcacgacttccttaactctgtcggtggctggcgtcacaaggag
cgccgcgacaagctactcgacatcttggacgtcgacctcgactggcacatgcatgctata
tctgacggcgagcgccgcagagtgcaattggtcatgggtctgatgtcggattgggacgtg
ctactactcgatgaggtcaccgttgacctcgacgtgctcgttcgagacgatctgttgaca
tttttgctgacagacagtgagacgcggggcgttacaattctatatgccacgcacatcttt
gacggcttgagcagattcccaactcatgtcgcacacatgcatctgggcaccgtcctatcg
caacccacgccatggccgttgacacctgagtctgcggcgcaggtcgtatccgtagacttg
ggtcccaacccgccactctacaagttggcgctgcagtggctgcgggaagatcgggagctc
agacgagaattggaaaagcaggggcgcaagacgcggggagcgcgaatcgacgaggtcccg
acggattcagagacgttttatcgaaaatatgattacagccactga
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