KEGG   Pleuronectes platessa (European plaice): 128424656
Entry
128424656         CDS       T09923                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    128424656
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pplt03000]
    128424656
   04121 Ubiquitin system [BR:pplt04121]
    128424656
   03036 Chromosome and associated proteins [BR:pplt03036]
    128424656
Enzymes [BR:pplt01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     128424656
Transcription factors [BR:pplt03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    128424656
Ubiquitin system [BR:pplt04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     128424656
Chromosome and associated proteins [BR:pplt03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128424656
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     128424656
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box Cupin_8 LRR_4 Tra_M
Other DBs
NCBI-GeneID: 128424656
NCBI-ProteinID: XP_053266949
LinkDB
Position
19:13713726..13733532
AA seq 1393 aa
MADPAETCPESGRRLRSICRRMYDENEDPSDVEEITNIRGFSVEEKLVSDRYSANFVHLM
EGKDFTYEYVQREALRIPLIFKEKDGLGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMTMAQFVRYYETPEEEREKLFNVISLEFSHTKLENLIKRPTVVDQVDWVDNMWPPDL
KHSQTEATNVISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHLFKGQKVFWLVPPT
LHNLALFEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGG
NILHSFNIPMQLTIHEIENRTKVHSKFRFPFYYEICWYVLERYLHCLTKRSYLSLEVRKE
PALMDYETKANTESPSSDSRSQDMNEDSCETQAREDQVEKADRAALDGPCSPDHGRGQHL
KAVLSIDSEDSCNPGSTSLDCPKTPSDSPASESQNKWTHLTEFELSGLRKLVEKLESLPE
NKKCVPEGIENPQALLDDIKLVLKEHADDDPKLAITGLPVVLWPKKTVKPRPPNRPKPKM
AASPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCI
MRQCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSNG
VVNDELPNCWECPKCNHAGKTGKASKQKRGPGFKYASNLPGSLLKETRLIRDSKEEPDSP
LVATATVTTLTTTSAVKRKAEREDVLKRNDEEPPKKRPPLLSLDGTPRPRLEDNPLRKKR
KLFDTNDEPVIVKKKKKLLKPDDPLTQKLLRQIKTERVHGDEEYDQDDREGDGFCLDRIY
RKEKNEYGDEDQEEDELEEEKLKKERDGRENKAKVMLNPLLRTSAVRESDHSSSNSPRAG
PSSESGEAQEKSSTQIKSRHQRRRLPNKELSKEFNQEVLQTEDRLSNQNHGSVKSEDSPA
NHNRRPVKNEDSLSNQNRKPLKTEDSTTNQSRRALKMEEGVVSQNRRPLKAEDGLTNQNH
RPIKSEPENEADDQKPRWPLNNGSGDLGDWLRHRGREVNGTPRGHSPLGWNRSAPITPMC
PRPLPCRSPPKCVQMERHVIRPPPISPPPDRLPLSDGEAHVMRREVWMTVFGHLTHRDLC
VCMRVCQTWNRWCCDKRLWKRINLNRCKSITPLMLSGLIRRQPVALDLSWTNISKKQLSW
LINRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRP
GQLDNRSKLRNVEDLRLAGLDVTDTSLRLIIRYMPSLSKLDLSYCNHVTDQSVNTLTAAG
TTTRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFVAEMSVSVQ
FQLIEEKLLQKIS
NT seq 4182 nt   +upstreamnt  +downstreamnt
atggcggaccccgcggagacgtgccctgaatccggacgcaggctgcgctccatctgccgg
aggatgtatgatgagaacgaggacccgtccgatgtggaggagatcaccaacatccgaggg
ttcagcgtggaggagaagcttgtcagtgacagatacagcgcgaacttcgtccacttgatg
gagggaaaagacttcacttatgaatatgtgcaaagggaggctctcaggatcccgctcatt
ttcaaagagaaagatggacttggcatcagaatgcccgatccagaatttacagtcagtgaa
atcaaaggtctagttgggagtcgtcggtctgtggatgtcatggacgtgagcactcagaaa
ggctctgaaatgaccatggctcagtttgtccgatattacgagacaccagaggaagagcgg
gagaaactcttcaatgtcatcagcctcgaattcagccacaccaagctggagaacctcatc
aagcggcccacggtggtggatcaagtggactgggtggacaacatgtggcctccggatctg
aaacacagccaaacagaggccaccaatgtcatctctgagatgaagtaccctaaagtgcaa
aggtactgtttgatgagtgtgaagggctgctacacagatttccacatcgacttcgggggc
acttcggtttggtatcatcttttcaagggacagaaagtgttctggctggtgcctcccacg
cttcataaccttgccctgttcgaggactgggtcctgtctggcaagcagagcgatatcttc
ctgggagaccgagcggacggatgccagagagtggagcttaagcaaggatacaccttcttc
atcccttctgggtggattcatgctgtctacactcctgaggacacactggtgttcggaggc
aacattctgcacagcttcaacatccctatgcagcttaccatccatgagatagagaatagg
accaaggttcattccaaattccgtttccccttctactacgagatatgctggtacgtcctg
gagagatacctgcactgcctgaccaagcgctcctacctctctctggaggtccgcaaagag
cctgcgctgatggactacgagacgaaggcgaacacagagagcccgtcctccgactcgagg
agccaggacatgaacgaggactcgtgcgagactcaagctcgggaggaccaggttgagaaa
gcagacagggccgccctcgatggcccctgctctcctgaccacgggaggggccaacacctc
aaagctgttttatcgattgactccgaggacagctgtaatccgggctccacttctctagat
tgccccaaaaccccctcggactctccggcgtccgagtctcagaataaatggactcatttg
acagagtttgaactgagcggactgaggaagctggttgagaagctggagtcactgcccgaa
aacaagaagtgtgtcccagagggaatagagaacccacaagccctgctggatgacataaag
cttgttttaaaagaacatgctgatgatgacccgaagttagcgatcactggacttcctgtg
gttttgtggcctaagaaaaccgtaaagccccggccccccaatcggccgaaacccaagatg
gcagcctcccctgcctctgcagtcaagctgtcagccagtcggggaacatctggtgccagg
agaagacggacccgctgtcggaagtgtgaggcgtgcctgcggacggagtgtggggagtgt
cacttctgtaaagacatgaagaagtttggtggaccgggacgcatgaagcagtcctgcatc
atgaggcagtgcatcgcacctgtccttccccacacagcagtgtgtctggtgtgtggagag
gcagggaaggaggacactgtggaggacgaggaagaaaagttcaacctcatgctcatggag
tgctccatctgtaatgagatcgttcatcccaactgtctcaaggtgaaagattctaacgga
gtcgtcaatgacgagttgccaaactgctgggagtgtccaaagtgcaaccatgcggggaaa
acagggaaagcctcaaagcaaaaaagggggccagggttcaagtacgcatcaaaccttccc
ggctcgctgcttaaagaaacacggttaatccgggattcaaaggaggagcccgactctccc
ctggtggctaccgcaacggttactactctgacgaccacgtctgctgtgaagaggaaggca
gagcgggaagacgtcctcaagaggaacgacgaagagcccccgaaaaaacggccccctttg
ttgtctctggatggtacgccccgaccaaggctggaggacaacccactaaggaaaaagagg
aaacttttcgacaccaatgatgaacctgtgattgtaaaaaagaagaagaaacttttgaaa
ccggatgatcctctgactcagaagctcctgcgtcaaatcaagactgagagggttcatggt
gatgaagaatatgaccaggacgatcgtgaaggagatggattctgcttggacaggatttat
cgaaaggagaaaaacgagtacggtgacgaggaccaagaggaagatgagttggaagaggag
aagcttaagaaagagagagacggtagagagaacaaagccaaggtcatgttaaatccactg
ctgagaacatctgcagtcagggaaagtgaccactcctcctccaactctcccagagctgga
ccaagcagcgaatcaggagaagctcaggagaagagctccactcagattaaatctcgccat
cagcgccggcggcttcccaacaaagagttgagcaaagagttcaaccaggaggttctccag
actgaagaccgcctgagcaaccagaaccacggttcagtgaagtcagaggacagtccagcc
aatcacaatcgtcgaccagtgaagaatgaggattctttgtccaatcagaaccgtaaacca
ctaaaaacagaggactcgaccactaaccagagccgcagggccctgaaaatggaggagggt
gtggtcagtcaaaacagacggccactgaaagcggaggacggcttgaccaatcaaaaccac
aggccgatcaaatctgagcccgagaacgaagcagacgaccagaagcctcgatggcctctc
aacaacggcagcggcgacctgggtgactggctgcggcatcgggggcgggaggtgaacggg
acgccacgtggccactcgcccctcggctggaacaggagcgcacccatcacgcccatgtgc
ccccgaccactcccctgcaggtcgccgcccaaatgcgttcaaatggagcgccacgtgatc
cgccctcctcccatcagccccccacctgaccggctgccgctgagcgacggcgaagcccac
gtgatgcgacgggaggtgtggatgacggtgttcggtcacctgacccacagagacctctgc
gtgtgcatgcgcgtctgccagacctggaacagatggtgctgtgacaagcggctctggaag
cgcatcaatctgaaccgatgtaagtccatcacacctctcatgctgagcggcctcatccgg
agacagccagtcgctctggacctcagctggaccaacatctccaagaagcagctcagctgg
ctgatcaacaggctgccaggtctgcgtgtgctgctgctgtcaggatgctcctgggtggcc
gtctctgctctctgcacctccagctgtcctctcctgcgaactctggatgtccagtgggtt
gagggactgaaagacgcccagatgagggacctgctgtcacctcccactgataacaggcca
ggtcagttggacaacaggagtaagctccggaacgtggaggacctgcgtctggctgggttg
gacgtcacggacacatccctgcgcctcatcatccgttacatgccctcgttatccaagctg
gatctcagctactgcaaccacgtgacggaccagtcggtcaacacgctgacggctgcaggg
acgaccaccagggactcgctcaccgacatcaacctgtcggtctgcaacagggtcacagac
cagtcgctgacctatttcaagcgctgcgggagcatatgtcacatcgacctgcggtactgc
aaacaggtgaccaaggaagggtgcgaccagttcgtcgcggaaatgtccgtcagcgtgcag
ttccagctgatcgaggagaaactgcttcagaagatcagctag

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