Pleuronectes platessa (European plaice): 128424762
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Entry
128424762 CDS
T09923
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04010
MAPK signaling pathway
pplt04137
Mitophagy - animal
pplt04141
Protein processing in endoplasmic reticulum
pplt04210
Apoptosis
pplt04217
Necroptosis
pplt04621
NOD-like receptor signaling pathway
pplt04622
RIG-I-like receptor signaling pathway
pplt04920
Adipocytokine signaling pathway
pplt05132
Salmonella infection
pplt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128424762 (traf2b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128424762 (traf2b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128424762 (traf2b)
09143 Cell growth and death
04210 Apoptosis
128424762 (traf2b)
04217 Necroptosis
128424762 (traf2b)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128424762 (traf2b)
04622 RIG-I-like receptor signaling pathway
128424762 (traf2b)
09152 Endocrine system
04920 Adipocytokine signaling pathway
128424762 (traf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128424762 (traf2b)
09171 Infectious disease: bacterial
05132 Salmonella infection
128424762 (traf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128424762 (traf2b)
04121 Ubiquitin system [BR:
pplt04121
]
128424762 (traf2b)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128424762 (traf2b)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128424762 (traf2b)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128424762 (traf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
Sina_ZnF
zf-RING_UBOX
TRAFD1-XIAF1_ZnF
ATG16
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
128424762
NCBI-ProteinID:
XP_053267114
LinkDB
All DBs
Position
19:complement(12277380..12290721)
Genome browser
AA seq
520 aa
AA seq
DB search
MARISLDCANSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACRQEEIYEEPMSILHSNEAFPDNAAGREIASLPARCLNQGCNWTGSIKEYEAQ
HEGQCEFDRVQCEACNTSILLSDKSRHNERECEARTLNCKYCKMTFNFKEIKAHDEICLK
FPLQCKDCGKKKIPREKFIDHSRICAKSKSACPFSEVGCKFVLDNGKLSDHEHSSTMEHL
RLLLPMVMSVGRVRAEASGPGEWQEDSGLGLYRAPEEGVSMDTGAAASPQSVDVEKKVIA
LENIVCVLNREVERSTVTLEAFSHQHRLDQEKIEDLSNKVRQLERTLNMRDLQLSETEHL
LRELQFCTYDGIFVWKVSDFARRRQDAVGGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT
GRGTHLSLFFVVMRGRYDALMKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS
EMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaatatcgctggactgtgcaaactctttaccgggaatcccactcagtgttctc
tcagtgcccatggagaataaatacaaatgtcagcagtgtctccaggtcctgaggaagccc
gttcaggctcagtgcggccatcgcttctgtgtacactgcttcaagcagctcaccagttct
gggccaaagccttgtgaggcctgccgccaggaggaaatatatgaggagcctatgtccatc
ctgcatagtaatgaggcctttccagacaatgcagcaggtcgagaaattgccagtcttcca
gccaggtgtttgaaccaaggctgcaattggacgggctctataaaagagtatgaggctcag
catgaaggccaatgcgaatttgatcgagttcagtgcgaggcctgcaacacctcgatcctg
ctctcggacaagtcccgccataatgagagagaatgtgaggccagaactctcaactgtaaa
tactgcaagatgactttcaactttaaagaaatcaaggcccatgatgaaatctgcctgaag
ttcccattacaatgtaaagactgtggcaagaaaaagatcccaagagaaaagttcattgac
cacagccgaatctgtgccaagtccaagagtgcctgtccattcagtgaagtgggctgcaaa
ttcgtgctggacaacgggaagctcagtgaccatgagcacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgatgtcagtgggtcgggtacgtgccgaggcttcaggtccc
ggcgagtggcaggaggactctggtctgggcctgtacagggctcctgaggagggagtcagt
atggacactggcgctgcagcctccccacagtcggtggacgtggaaaagaaggtgattgct
ttagaaaacatagtgtgtgtcttgaaccgtgaagtggagcgcagcactgtgacattggaa
gctttctcgcatcaacatcgcttagaccaggaaaagattgaggatctgtcaaacaaagta
cgacagctggagaggacgctgaatatgagagacttgcagctgtcggagaccgaacacctg
ctgcgagaactccagttctgcacctacgatgggatatttgtctggaaagtctccgacttc
gcgcgccgcagacaggacgctgttggtgggcggactcctgcaatgttctcacctgcgttc
tactccagcaagtacggctacaaaatgtgtctgaggctgtatctgaacggcgatggaacg
ggacggggaacgcacctttcgctgttctttgtggtcatgaggggccggtatgacgctctg
atgaaatggccgttcagtcagaaggtgactctaatgctcttggatcagaataacagggag
cacattatcgacgctttccgccctgatgtcacctccacatccttccagcggccgatcagt
gagatgaacatcgccagtggctgcccgttgttctgcccactggctaaattggccggcaag
agcccctatttgagagatgacacaattttcatcaaagccatagtcgacctcacaggctta
tag
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integrated database retrieval system
