Pleuronectes platessa (European plaice): 128424856
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Entry
128424856 CDS
T09923
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04010
MAPK signaling pathway
pplt04137
Mitophagy - animal
pplt04141
Protein processing in endoplasmic reticulum
pplt04210
Apoptosis
pplt04217
Necroptosis
pplt04621
NOD-like receptor signaling pathway
pplt04622
RIG-I-like receptor signaling pathway
pplt04920
Adipocytokine signaling pathway
pplt05132
Salmonella infection
pplt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128424856
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128424856
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128424856
09143 Cell growth and death
04210 Apoptosis
128424856
04217 Necroptosis
128424856
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128424856
04622 RIG-I-like receptor signaling pathway
128424856
09152 Endocrine system
04920 Adipocytokine signaling pathway
128424856
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128424856
09171 Infectious disease: bacterial
05132 Salmonella infection
128424856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128424856
04121 Ubiquitin system [BR:
pplt04121
]
128424856
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128424856
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128424856
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
128424856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
ATG16
zf-C3HC4_2
zf-RING_4
zf-C3HC4_4
zf-RING_6
DUF1664
Motif
Other DBs
NCBI-GeneID:
128424856
NCBI-ProteinID:
XP_053267256
LinkDB
All DBs
Position
19:complement(6459505..6469572)
Genome browser
AA seq
580 aa
AA seq
DB search
MAAQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCSACIKEDIFEDPTSILKQGCAFPDNAVRREVENLSAVCINESCTWKGSIKE
YELSHEGKCEFMIIPCPSCKERIRFNEQERHSERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDISVEKEKIHEHERTYA
YEHLNLLLHYIMGMKVSMEGLQPQGLEVAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAAASSSSSSSAPTLSVSTSFTPLPSSVGAALELQLHSEKTKVAELGRRCTELEVKSGT
FENVVCVLNREVERFATTLEASNRQHKLDQDKIEALSNKVRQLERTVGLKDLTVAEMEGR
LREMSATTFEGVFVWRISDFAKKRQEAIVGRAPAMFSPAFYTNKYGYKMCLRIYLNGDGT
GRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHIIDAFRPDVTSSSFQRPVS
EMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacaggaaccgtcccctccttcgtccatggagagcaacaagcccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacata
ctgcgacgaccgtttcaggcccagtgtggacaccgcttctgctcctactgcttcaacagg
acagtcagtaatggaccccagaagtgcagtgcctgcattaaagaggacatttttgaggac
cctacgtccattttgaaacaaggatgtgcttttccagacaacgctgtccgaagggaggtt
gagaacctgtcagctgtttgtatcaatgaaagttgcacttggaaaggcagcattaaagag
tacgagctgagccacgaggggaagtgtgagttcatgatcatcccctgtccgtcctgcaag
gaacgcattcgcttcaacgaacaggagcgccatagtgagcgagagtgcccggagaggacg
ctcaactgcaagtactgcaaggagccatttcacttcaaaaacatcaaggcacatgatgag
atctgtcccaagtacccgatgatctgtgaaggctgcgccaagaagaaaatacccagagag
aagtatgtggaccatattaagttctgcagcaaattcagaactccgtgtcgatttcatgtt
gtgggatgtgacatttctgtggagaaggagaagattcacgaacacgagcgcacctacgcc
tacgagcacctcaatctgttgttgcactacatcatgggcatgaaagtgagcatggagggc
ctgcagccccagggactggaagtagccggacacaaactggtggagctccaacagtccctc
agggagctcgaggccagagtctcccagctcagcaccacctcctctgggcctcccgtgcag
ggagccgccgccgcctcctcctcatcctccagctccgctcccaccctctctgtttccacg
tctttcacaccattgcccagttcggtgggagcagcgctggagctccagctccacagtgag
aagaccaaggtggccgagctgggacgcaggtgcacggagctggaggtcaaatcgggaacg
tttgaaaatgtggtgtgtgtgctgaacagagaggtggagaggttcgccaccaccctggag
gccagcaaccgtcagcataaactggaccaggataagatcgaggctctcagtaataaggtg
cgacagctggagaggacagtggggctgaaggacctgacagttgctgagatggagggccgg
ctcagagaaatgtctgccaccaccttcgagggcgtctttgtctggaggatctcagatttt
gccaaaaagagacaggaagcgattgtcggtcgagcccctgccatgttctcaccagccttc
tacaccaacaagtatggctataagatgtgtctgcggatctacctgaatggagatgggacg
gggcgtggcagccacttgtccttgttctttgtggtgatgagggggctgagtgacgctctg
ctcaaatggccctttaaccagaaggtgacattgatgctgctggaccagagcaacagggag
cacatcatcgacgccttccgacctgatgtcacgtcctcctccttccagagacccgtgagc
gagatgaacatcgccagcggctgtccgctcttctgcccgctctccaagctcgatgccaag
aactcatacatccgcgacgacaccattttcatcaaggcgatcgtggacctcactggcctc
tag
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