Pleuronectes platessa (European plaice): 128426301
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Entry
128426301 CDS
T09923
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03440
Homologous recombination
pplt03460
Fanconi anemia pathway
pplt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128426301
09124 Replication and repair
03440 Homologous recombination
128426301
03460 Fanconi anemia pathway
128426301
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pplt01009
]
128426301
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128426301
03036 Chromosome and associated proteins [BR:
pplt03036
]
128426301
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128426301
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128426301
Protein phosphatases and associated proteins [BR:
pplt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128426301
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128426301
Multi subunit type E3
BRCC complex
128426301
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128426301
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128426301
BRCA1-A complex
128426301
BRCA1-B complex
128426301
BRCA1-C complex
128426301
BRCA complex
128426301
FA (Fanconi anemia) pathway
Downstream FA components
128426301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
BRCT_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-Nse
RTT107_BRCT_5
zf-RING_5
zf-RING_4
zf-ANAPC11
zf-RING_6
zf-PARP
zf-MIZ
zf-RING_10
PTCB-BRCT
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
128426301
NCBI-ProteinID:
XP_053269090
LinkDB
All DBs
Position
21:5617733..5636378
Genome browser
AA seq
1381 aa
AA seq
DB search
MEMPKASDVKKGISVLWETLQCPICLDLLTVPVSTKCDHQFCKFCIMKLVDTSKQNRANC
PVCKTKITKRSLQVSPGFQKLVAGLQDIIQAYEHDTGTNYFTGMSLQEKQLGVTDAPSTK
PPHVLSGETANTDLDYVENEDQDDLPRSHSSTIEAQNGFARLMELEDSTPLTTEHEGLDS
GLGDALPTSDKKLQSSADNLEPVETEMSEAVEKASTHKTRGKIRSGKLESASLLPVAIPD
ETKCQPLRKSSRKKQKTDLESEKILQRKRKKSLEKVAEWLMKVPPEGSLELEKPDKDPDD
SDGGSSTSTIDVKQHLSDINSKREDRAKALEDHVFGAVYKRDRRGKRNSSRSLFVEPTIT
KHTTDSEDENQSDSEEEQLLTEDVNDSSDIFKKAEQMEDLEENDVVDKDVIAESASEPQQ
PQRKSKKRMQNPLQQVDSDLKEQAEAKSEKTEPKKPDRRKGKNTMSEKGKPTRVSKPLVL
VGVKNGETNPKTRVKSGEVQVQIENYPSSEDPQTPIMRSNRRSRRLQLFAEEVQDGHKKA
NSKANVIEKDVTVAQQQEEVEGETLDKAESPKGEKLAKRNGCVYDEDLGGIENVESGKRT
RREQESIAEVQNLPNSETLSEATVACSVPVVPSSPCPTEATVFGPTLENNNLTEQSSKNI
ELKTSACVITEKEEEKNDSELDTEQLLQSFKATKRKSFRLGGPKGKRSRSSVRGNTQGAE
GEGNYFVCSSVESAKKQTHKKTSVIIDQEALTDDENSLCSDLISPSISPKLTRKSVEKPD
QVVDEALNPVTTGNCLSRNSQSSALTPNQVSKREIESPQFVESGLRFTGVEHEEVNEASK
SSQIPNGQLDCSVKDAGKWKEMRDSISPGKGERILVAESSLTPDGLVTPLVPTAHGSSEL
STHSPIKSNLRKRRRTQRLESSSDSDESREELPTLTQIFGTSALPAAVTRVRGDSREATR
CEAACVPADAAERLSRPPACPSPDCVPSSQGSVDLFGSPDECDAPVNENIDIESSQFSSE
VLVTQQKIQMQKELVRLEKLMALVSEVLHEKEQSPAKETNHSCKTTGPDTQEPLPCNQDA
RQDSDQKGVPEAEREPCTRASDGREVTESSVSKPVSGAQTSVQCSTHTALSVKGTDASKT
PVLSSAAKTLKSCNSPSDGQEDKENTTPPKDRTKAKLVLVSSGLGPNEQIIVKKFAKRVG
ARVISQVTEEVTHIVMRTDEQLVCERTLKYFLGIAGRKWVVSFQWIAECFKQKKVLDESL
FEVKGDVVNGPNHQGPSRARTTADSNLLMSGYSICFQGPFTDMTTDEMEWMVELCGAAVV
TDPLLLDSKQKSRQLVIVQPGPESSSSSFSRLLRQASVVTRGWLLDTVATYTLQNFNNYS
L
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgccaaaggcctcagatgtgaagaaggggatctcagtcctctgggagactctg
cagtgtccgatatgcttggatttattgacggtaccggtatctaccaagtgtgaccaccag
ttttgcaaattttgcatcatgaaacttgtggatacctccaaacaaaaccgggccaactgt
ccagtttgcaaaaccaagataaccaaaaggagtttgcaggtgagccctgggtttcagaaa
cttgttgcaggactgcaggacatcatacaagcatatgaacatgacactggcacaaactat
ttcactggaatgtccctgcaagaaaaacagttgggtgtcacagatgccccatccaccaaa
cctcctcatgtcctatctggagaaactgccaacactgacctggactatgtggaaaacgaa
gaccaagatgatcttccaaggtcccactcttcaactatagaagcccagaatggatttgca
agactcatggaacttgaagactcgactcctttgacgacagagcacgaaggcctggacagc
ggccttggggatgctttgccgacgtctgacaagaaactgcaaagctctgcagataatttg
gaaccagtagaaacagaaatgtcagaggctgtggaaaaggcatcaactcataaaactaga
ggcaaaattagatctggtaaattggagagtgcctcccttcttccggtagcaattcctgac
gagacaaaatgtcagcctttaagaaagtcttcgcggaagaaacagaaaacagatctggag
tctgagaagattcttcagcggaaacgtaagaaaagtcttgaaaaggttgctgagtggctt
atgaaagttccacctgagggaagtctcgaattagaaaaaccagacaaagacccagatgac
tctgatggcggttcttccacctcaacaatagatgtaaagcaacacctgagcgatatcaat
tctaagagagaggatcgtgccaaagccctcgaagaccatgtgttcggagccgtctacaaa
cgagacagacgagggaagaggaatagctctcgatcactttttgttgagccaacaatcaca
aaacacacaacagactctgaggatgaaaaccaaagtgactcagaggaagaacaactgcta
acagaagacgtaaatgatagcagtgacatttttaaaaaagccgaacagatggaagatttg
gaggaaaatgatgttgttgacaaagatgtgattgctgagtcggcgtctgaaccacagcaa
ccacaaagaaagtcaaagaaaagaatgcaaaaccctctgcagcaggttgacagtgatttg
aaggagcaagctgaggcgaagtccgaaaaaactgagccaaagaagcctgacaggaggaaa
ggtaaaaacaccatgtcagaaaaaggcaaacctacaagagtgtcgaagccccttgttctc
gttggagttaaaaatggagaaaccaatccaaagactagagtgaagtcaggagaggttcag
gtacaaattgagaactatcccagcagcgaggacccacaaacccccatcatgaggagcaac
aggagaagcagaaggcttcagctctttgccgaggaagtccaggacggtcacaagaaagca
aactcgaaagctaatgtaattgaaaaagatgtcactgtcgcacagcagcaggaggaagtt
gaaggtgaaacactggataaagcagaatcacctaagggtgaaaagttggccaaaagaaat
ggatgtgtttatgatgaagatttaggaggaattgaaaacgtggagtctggtaagagaact
cgacgagaacaagagtccattgctgaagtgcagaatttgccgaattctgaaactctctct
gaagctactgttgcttgttctgtcccagtggtcccaagttctccatgtccaacggaagca
actgtgtttggtccaacacttgaaaataacaatctgactgagcaatcctcaaaaaatatt
gagttgaaaacatcagcttgcgtgataacggagaaagaggaggaaaagaacgacagcgag
ctggacacagaacaactgctccagagcttcaaagccacgaagaggaaatctttccgtctc
ggtggtccgaaagggaaaaggagccgtagctcagtccgaggaaacacacaaggtgctgaa
ggagagggaaattactttgtttgttctagtgttgaatctgcaaaaaaacagacgcacaag
aaaacatctgtaatcatcgaccaggaggcactgacagatgatgaaaactcattgtgtagt
gacttgatttctccttcgatctccccaaaactgacacgaaaatcagttgagaaaccagat
caagtggtggatgaagccttgaaccctgtcaccactggtaactgtctttccaggaacagt
cagagcagcgccctcactcctaatcaagtctcaaaacgtgaaattgaaagtcctcagttc
gtagagtccgggctccgcttcacaggtgttgagcacgaggaggtaaacgaagcctcgaag
agctctcagatcccaaacggtcagcttgattgttcagtgaaggatgctgggaaatggaag
gagatgagagacagcatttctcctggaaaaggagaacgtatcttagtcgctgagtcttct
ttaactcctgacggcctggtgacaccgcttgtcccgacggcccatggaagcagcgagctc
agcacacactctcccatcaagagcaacttgaggaagaggagaaggactcagaggctggag
tcttcatccgattcagatgaatccagagaggaattacctacgttgactcaaatctttggg
acgtcggctcttccggctgctgtgacccgggttcggggagactccagggaagccactcga
tgtgaggctgcttgtgttccagctgatgcagcagagcggttgagccgtccgcctgcatgc
cccagccccgactgtgttccctccagccaagggtctgtggacctgttcggatcgccagat
gaatgtgatgctccagtaaatgaaaacattgacattgagtcatcacaattttcaagcgag
gtccttgtcacacagcaaaagatacagatgcagaaggagctggtgaggctggagaagctg
atggctctggtgtcagaggtgcttcatgagaaagagcaaagtccagcaaaagagacgaat
cacagctgcaaaaccaccggcccagacactcaggaacccctcccatgtaaccaggacgca
cggcaagactcagaccagaaaggcgttccagaggcagagcgagagccctgcacaagagca
tctgatggcagagaggtcactgagtccagcgtgtcgaagcctgtcagcggtgcacagacg
tcagtgcagtgctctacacacacagcgctgagtgtcaagggcactgacgcctccaagacg
cctgttttaagctcagcagccaaaacactgaagagctgtaattcaccatcggatggacaa
gaagacaaagaaaacaccactcctccaaaagacaggactaaagccaagctggtgcttgtg
tcgtctggattagggcccaatgagcagataattgtgaaaaagtttgccaagcgagtcggg
gctcgtgtgatttcccaggtgacggaggaggtcacacacatcgtcatgcgcacagatgaa
cagctggtatgcgagcgcacgctgaagtacttccttggcatcgcgggcaggaagtgggtc
gtgagtttccaatggattgcagagtgcttcaaacaaaagaaagtcctagatgagagtctc
ttcgaagtgaaaggcgacgtagtgaacggaccgaaccaccagggcccctcaagagctcga
accactgcagacagtaatctgctcatgagcggctacagcatctgcttccagggtccattc
acagacatgactacagatgaaatggagtggatggtggagctctgtggagcagctgtagtt
acagatccacttctcctagacagtaaacagaagtcccgtcagctggtcattgtacagcct
ggacctgagtcatcatcgtcctccttcagccgtctcctcagacaggcgagtgtggtgaca
cgtggttggctcttggacacagtggcaacctacaccctccaaaacttcaacaactactca
ctatga
DBGET
integrated database retrieval system
