Pleuronectes platessa (European plaice): 128428712
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Entry
128428712 CDS
T09923
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128428712 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128428712 (irf5)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
128428712 (irf5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
128428712
NCBI-ProteinID:
XP_053270916
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Position
22:complement(19035603..19039277)
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AA seq
482 aa
AA seq
DB search
MSVQPRRIRLKPWLLVQVNSGRFPGLQWISPEQRLFQIPWKHATRHTPMSEEENTVFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVRPYKIYEVCEQPAST
GDVTGDVTGDVTGDVTGGFDDDDEEMPNLMDLTINPRISDPSPFNQFSLSSNEMFGPHHV
IPVPVLPLNSDLQGPGQNFVSGLSTRLQDLNSLPPPAASVTPGPDLMEASSIGGIQNQQH
CKYDLLSSVPLTDLDLKFQYRGRIMGSLIVSNPQGCRLYSGHLEPSPEQVELFGPVTLQQ
VLFPGPSEIQNQKQRFYTEALLDVMDRGLILEIWEQDIYAIRLCQCKVFWSGPGTTEQSP
PNPLEREKKIKVFSLNDFLQGLILFQKGEAPNPPPFEIYFCFGEDWPDKKPKEKKLIIVQ
VVPVVARILTEMFSGELSWSTDSIRLQISNPDVKDQTVEQFKELQKLLQSQQIQGPWTPH
VA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccagccacggaggatccgcctgaagccgtggctcctggtgcaggtgaacagc
ggcaggttccccgggctccagtggatcagcccagaacaacgcctcttccagatcccctgg
aaacacgctacacgccacacgccaatgtctgaggaagaaaacactgtcttcaaggcatgg
gctcttgagacaggtaaatatcaggagggtgtcgatgaaccggacccggccaagtggaag
gccaaccttcgctgcgctctgaacaagagtcgagagtttcagctgaaatacgacggaacc
aaagagacgccggttcgtccgtacaagatctacgaggtctgcgagcagccagcgagcaca
ggcgatgtcacaggtgatgtcacaggtgatgtcacaggcgatgtcacaggtggctttgat
gatgatgatgaagagatgccaaacctgatggacctcaccatcaatcccaggatcagtgac
ccctcccccttcaatcagttcagtttatcttccaatgagatgtttggacctcatcatgtg
atcccggtgcccgtcctacctttgaactctgacctccagggcccgggtcagaactttgtc
tctggactctcgaccagactccaggacttgaattctttgccgccacccgctgcctctgta
acccctggaccggacctgatggaggccagcagtataggagggatccagaaccagcaacac
tgcaagtacgacctgctaagcagtgtcccactaacagatctggacctgaagttccagtac
cggggtcggatcatgggctctctgatagtgagcaaccctcagggctgccggctatactct
ggtcatctagagccaagcccggaacaggttgagctgtttggaccagtcaccctgcagcag
gtcctgttcccagggccgtccgagatccagaaccagaagcagcggttctacaccgaggcc
ctgctagatgtgatggacagaggtctgatcctggagatctgggaacaggacatttacgcc
atccgcctctgtcagtgtaaggtgttctggtctggaccgggaactaccgaacagagtcca
cccaaccccctggagcgcgagaaaaagatcaaagttttcagcctgaatgacttccttcaa
ggtctgatcctgttccagaaaggtgaagccccaaaccctccaccctttgagatctacttc
tgctttggggaggactggccggacaagaaacccaaagagaaaaaactcatcatcgttcag
gtggttcctgttgtggctcggatcctgacggagatgttctcaggagaactcagctggtcg
accgacagcatccgactgcagatctcaaaccctgacgtcaaggaccagacggtggagcaa
tttaaagaactgcagaagctcctgcagagccaacaaatccagggcccctggaccccccac
gtggcctga
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integrated database retrieval system
