Pleuronectes platessa (European plaice): 128436511
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Entry
128436511 CDS
T09923
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128436511 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128436511 (kdm2aa)
04121 Ubiquitin system [BR:
pplt04121
]
128436511 (kdm2aa)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128436511 (kdm2aa)
Enzymes [BR:
pplt01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
128436511 (kdm2aa)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
128436511 (kdm2aa)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128436511 (kdm2aa)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128436511 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
128436511 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
JmjC
F-box
Cupin_8
PHD
LRR_At1g61320_AtMIF1
LRR_Zer-1
LRR_RPS2
LRR_4
Motif
Other DBs
NCBI-GeneID:
128436511
NCBI-ProteinID:
XP_053274214
LinkDB
All DBs
Position
3:28892156..28911501
Genome browser
AA seq
1257 aa
AA seq
DB search
MMDDSKTRHSKRLRAGIRRRYHDDGISDEEIDGRRMFDLEEKVTSQRFTSDRIIRMEGKD
LSYEFVQRCGLRDPIIFEKPDGLGIMMPDPGFSVNDVKLFVGSRRMIDVMDVSTQKGTEM
SMAQWARYYETPPCQREKLYNVISLEFSHTKLENLVKRPTTVDLIDWVDKMWPRHLKERQ
RESTNSINDMQYPKVQKYCLMSVEGCYTDFHIDFGGTSVWYHILRGSKVFWLFPPTPPNL
ELYENWVLSGKQGDIFLGDRASDCQRIELTQGCTFIIPSGWVHAVYTPVDSMVFGGNFLH
SFNIPTQLNICNIEDRTRVPGKFRYPFFYEMCWYVLERYVFSLTRTSYLTPEFQKHSLGI
GLNKPSIPDLAVEQVKEEEVEGGDSDEEPSEQQSDKPAAKMYLTPFELEGLWNLLGKLES
LPSNKKCVPAGIHNAPALITHIKALLKEHANDNSKLSYTGKPIVKWPKRPSWYQPPPPPP
TPPPRPKLASTPIIPRPQKPASSMSVLRRRRVRCKRCEACMRPECGDCNFCRDMKKFGGP
GKLKQTCVLRQCLSPGLPLSAVCEICKEPNQEESGDPSLILMECSNCAQIVHPACLSVQG
EGLVNKDLPSCWECPKCVQGITDPEQSKGDRVEGHSLKRKSSTLLDARMAKIYRRQRHSH
DGDDSASDDDDEASQRRKMMLHARGGGHSSRRGFVPNRRGLLRGGSAQRGSRGLVTSGSS
LLKLKRGMNMKESGRRGRGVRLRGGSRMQRRGDDSDESDDDDDDDDDDDDDDDDDDDDDD
DEEEDEEEDSEDGVKEQQLRRHRRRRRTDYDEDENEDSEGQEFDPEEEDMDTLEDDEEDD
DGDEDGRWDSDPEPPVLLVSDLNDDLLSGSYLTVTLQRPHKAKRQSGSIVPKLEAAMGPR
TAAMGAGGQQGFIQRKTTLSKPSRLKGTDTTADSVTLRGPGRQRMRGNHGDRGTRDCSAS
SSEDQEPAASSFQSPLSLLSVLSFKDEGNERGGEKEVWVSVFRYLTRVELLACMTVCKAW
YKWSCDKRLWSHLDVSRCSPLSNQALAGIVKRQPTSLDLSWTPLAKRQLNCLLTRLPGLR
ELRVTGLSWSCLSALVSPTLPYLRLLDLRWCEGLKDAQIKEIILPPESSRSRLRNMVTLR
LSGLDISDSTLRLLQRHMPQLERLDLAHCKDITDSSIALLAAAGTHTRNNLTELTLAGCS
ELTDGCLSYLKRLTSLNLLDLRGCKSVSRRVCDSFISDLSHIALYCMMEEKLIQRLD
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgactccaagacacggcacagcaaaagactgcgagctggtatccggagacgt
taccatgacgatggtatttcagatgaggagattgatggaaggaggatgtttgacttggag
gagaaagtcaccagtcagaggttcacctctgacaggatcattcgcatggagggaaaagac
ttgtcatacgagttcgtccagagatgtggtcttagggacccaatcatctttgagaagcct
gatggactgggaatcatgatgcctgatcctggcttcagtgtcaatgacgtcaagcttttt
gttggtagcagacgtatgattgacgtgatggacgtgagcactcagaaggggacagagatg
tccatggcccagtgggcacgttactatgagacccctccgtgtcagagagagaagctctat
aatgtcatcagcctggagttcagccacaccaagctggagaacctggtcaagagaccgacc
acagtggatctgattgactgggtggacaagatgtggcctcgtcacctgaaagagagacag
agggagtccacaaactctatcaatgacatgcagtaccccaaagtacaaaaatactgtctg
atgagtgtggagggctgctacacagactttcacattgactttggagggacttcagtgtgg
tatcacatactgagaggaagcaaggtgttctggctcttcccccccacccctccgaatctg
gagctctatgagaactgggtgctgtcagggaaacagggagacatttttctaggtgaccgg
gcgtctgactgccaaaggattgaactcacacagggctgcaccttcatcataccctcaggt
tgggttcatgctgtctacacccctgtggactctatggtatttggaggaaacttcctgcac
agcttcaacatccctacgcaacttaacatctgtaacatagaggaccgaacacgggttcca
gggaagttccgttaccccttcttctatgagatgtgctggtatgtgttggagcgttatgtt
ttcagcctgaccaggacctcctacctcacaccagagtttcagaaacactcgttgggcatt
ggtctgaataagccgtcaatcccagatctggctgttgagcaggtgaaggaggaagaggtg
gagggaggggacagtgatgaagaaccttcagagcagcagtctgacaaacctgcagctaaa
atgtatctgactccctttgaactggaggggctctggaacctgctgggtaaactggagtct
ctgccctccaacaaaaagtgtgtcccagctgggatacacaatgcccctgcactcattaca
cacattaaggcacttctgaaagaacatgccaatgataattccaaactgtcctacacagga
aaacccatagtcaagtggccaaagcggccatcatggtaccagccgccacctcctcctcca
acaccaccgcctcgtcctaaactggcctccacacccatcatcccacgaccacagaaacca
gcctcctcgatgtctgtgctgagacgacgcagggtcaggtgtaagcgctgtgaggcctgt
atgagaccagaatgtggagactgcaacttctgcagagatatgaagaagtttggaggacct
gggaaactcaagcagacctgtgtgctacgacagtgtctttctccgggcctccccctgtct
gcagtgtgtgagatctgcaaggaacccaatcaagaggaaagtggagacccctctctgatc
ctgatggagtgttccaactgtgcccagatcgtccatcctgcctgtctctcggttcagggt
gaaggactggtgaacaaagacctgccaagttgttgggagtgcccaaaatgtgtccaagga
atcactgacccagagcagtctaaaggtgacagagttgaaggccattcattgaagcgcaaa
tcttccaccctcctggacgctcgaatggccaagatttaccgacgacagagacacagccac
gatggagatgactctgccagtgatgacgacgatgaagcctctcagaggagaaaaatgatg
ctccatgctcgaggggggggccactcttccaggagggggtttgtccccaacaggagaggt
ctgctgagaggaggctcagcccaaagaggaagcagaggccttgtaacttctggctcctcc
ctcctcaagctaaagcgaggcatgaacatgaaggagagtgggcggaggggacgaggggtg
aggctgcggggaggctccaggatgcagcgaagaggagatgattcggacgagtcagacgat
gacgacgatgacgacgacgacgacgatgatgatgacgacgacgatgatgatgatgatgat
gatgaagaggaggacgaagaagaggacagtgaagatggagtgaaagaacaacaacttcgc
agacataggaggaggcgcaggactgactacgatgaagatgagaatgaggacagtgagggg
caggagtttgaccctgaagaggaggatatggacacgctggaagatgacgaggaagatgac
gatggggatgaggatgggcgctgggattcagacccagaacccccggtcctccttgtgtct
gatctcaatgatgacctgctgagtgggtcctacttgactgtcaccctacagcgcccccac
aaggccaagagacaatctggctcgatagttccgaagcttgaggcagccatgggtccgagg
acggctgcgatgggtgctggtggtcagcagggcttcatccagagaaagacgactctgtcc
aaaccttcccgtctcaagggcactgacactacagctgacagcgtaacactaagaggacct
ggcaggcaacgtatgcggggtaaccatggcgacagagggactagagattgctcagcatca
tcttcagaagatcaggaacctgctgcatcctccttccagtctcctctgtccctgctgtct
gtgctgtcctttaaggacgagggtaatgagagaggcggggagaaggaagtttgggtgtct
gtgttcagatacttgaccagagtcgagctgctggcctgcatgactgtgtgtaaggcctgg
tacaagtggagctgtgacaagcgtctgtggagccacttggatgtgagccgctgcagcccg
ctcagtaatcaggccctggcaggtatcgtcaaacgccagcccacctctcttgacctgtcc
tggacccccctggccaaaagacagctcaactgtctgctcaccaggctcccaggtctgagg
gagttgagggtgactggtctttcgtggtcatgtctctcagcgttggtctcacccactctg
ccttacctgcggctgctggacctgcgctggtgtgaaggccttaaagacgcccagattaaa
gagatcatcttgccacctgaatcctctcgcagcagactacggaacatggtgacactgcgt
ctgtcgggtctggacatcagtgactctactctgaggttgctgcagcgccacatgcctcag
ctggagaggttggacctggctcactgcaaagacatcacagactcgtccattgctttgctg
gcagcagccgggacacacacacgcaacaacctcactgagctcacactggcaggctgtagc
gagttgacagacggctgtctgtcctacctgaagcgtctcacctctctgaatctgctcgat
ctcagaggttgtaagagtgtcagccgacgagtgtgtgactcctttatctccgatctgtct
cacatcgccctctactgtatgatggaggagaagctcatccagcgcctggactaa
DBGET
integrated database retrieval system
