Pleuronectes platessa (European plaice): 128437504
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Entry
128437504 CDS
T09923
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pplt00536
]
128437504
Glycosaminoglycan binding proteins [BR:
pplt00536
]
Heparan sulfate / Heparin
Axon guidance molecules
128437504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Laminin_G_2
Laminin_G_1
LRR_4
EGF
LRR_5
hEGF
EGF_TEN
LRR_1
LRR_9
LRR_14
LRRCT
LRRNT
Laminin_G_3
EGF_Teneurin
EGF_CA
EGF_MSP1_1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128437504
NCBI-ProteinID:
XP_053275664
LinkDB
All DBs
Position
3:2139872..2230397
Genome browser
AA seq
2078 aa
AA seq
DB search
MPAGRGGDGAGSGPGRGTPAVAPGRAPGPGLWRMVLWAGVVLLAGGGGCAEACPALCSCL
GNTVDCHGLGIHSVPKNIPRGTERLDLNGNNLTVITKTDFSGLKHLRVLHLMENQISNVE
RGAFDELRELERLRLNKNHLSQFPELLFQKNEALSRLDLSENGIQAVPRRAFRGATDLKN
LQLDKNHISCIEEGAFRALRSLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHSNSLRCDC
HLAWLSPWLRQRPALGLYTQCSSPPTLRGLNLAELRKSDFACSGHGGSAFVQPCSLASGS
CPPMCSCSNNIVDCRGRGLTAIPAHLPEAMTEIRLEQNGIKSVPPGAFTSYKKLRRIDLS
NNQISEIAPDAFHGLRALNSLVLYGNKITELPGGVFDALASLELLLLNANKIHCIRAAVF
KDLENLALLSLYDNKIQSLAKGTFSSLHSIQTLHLAQNPFVCDCNVKWLADFLRSNPIET
SGARCASPRRLANKRIAQIKSNKFRCSAKEQYHIPGTEDRRQSYECNSKPVCPAKCRCEA
NVVDCSNLRLTKFPEHLPSSTEELRLNNNDLSVLEATGAFKGLTQLKKINLSNNKISDIE
DGAFDGASSAVELHLTANHLESVRGSMFRGMEGLRMLMLRNNKISCIHNGSFTGLTNVRL
LSLYDNQLRSILPGAFDTLPNLSTLNLLANPFTCDCRLSWFGAWLRSRRIVTGNPRCQGP
AFLREIPLQDVAVLDFRCEDGSVLDDSRCVSGPQCPTQCTCMDTVVRCSNKHLQGLPRGL
PRNVTELYLDGNQFTSVPKDLATFKYLQLVDLSNNKISSLSDDSFSNMSQLTTLILSYNS
LRCIPPLSLSGLRSLRLLSLHGNDISELQQGIFSDVSSLSHLAIGANPLYCDCRLLWLSD
WVKSGYKEPGIARCAGPGDMEGKLLLTTPADKFQCLGPVEASVQAKCSPCVSSPCQNQGV
CQVQHTQPYTCTCKAGFTGEHCETPVDACVSNPCTNGGTCLSDEQTRGFSCACAFGFHAT
FCEVNVDDCQDHGCENGATCVDGVGNYTCLCSPDYTGLFCEEEEGGCSPGRNPCQHQSTC
VSSPTGSRCVCIPGWVGPDCSIDYNECVDHRCQNGAQCVDHLDGYSCVCPQGYSGQFCEV
ALVPPSPCQLASCQNGAPCLEGTGTAECQCPPGFEGQSCEKLVSVNFVDRDSYVELQDVK
NWPQANISLQVSTAEDNGILLYNGDNEPIAVELHQGHVRVTYDPGNQPATTIYSTETVND
GHFHTVELVTFNRMVNLSVDGGEPTTLDSQGRSQLVTGEAPLYVGGLPEQAMPASLGLSS
QTLNTSSFHGCIRNLYINQELQDFTRSHMKPGVVPGCQACRKLLCLHGLCRPDTAQGPQC
HCQTGWTGQHCDQPIAGALTGPEVVATATSVHPCEGNKCVSGVCTELDAHTYRCDCQEGY
HGALCNLQGAPEASCQGLQCLHGQCEETEGGQRCVCQEGFTGESCATESPCRGEPVRDFH
RLQRGTVLCQTSKTFSWVECRGRCQAGAGPGAGPGAGPGAGPGAGPGATGAPCCAPLRVR
RRRLPFECDDGTSFTQDVEKPVECGCKECVCIPGWVGPDCSIDYNECVDHRCQNGAQCVD
HLDGYSCVCPQGYRYWEHWECWECRSGQFCEVALVPPSPCQLASCQNGAPCLEGTGTAEC
QCPPGFEGQSCEKLVSVNFVDRDSYVELQDVKNWPQANISLQVSTAEDNGILLYNGDNEP
IAVELHQGHVRVTYDPGNQPATTIYSTETVNDGHFHTVELVTFNRMVNLSVDGGEPTTLD
SQGRSQLVTGEAPLYVGGLPEQAMPASLGLSSQTLNTSSFHGCIRNLYINQELQDFTRSH
MKPGVVPGCQACRKLLCLHGLCRPDTAQGPQCHCQTGWTGQHCDQPIAGALTGPEVVATA
TSVHPCDGNKCVSGVCTELDAHTYRCDCQEGYHGALCNLQGAPEASCQGLQCLHGQCEET
EGGQRCVCQEGFTGESCATESPCRGEPVRDFHRLQRGTVLCQTSKTFSWVECRGRCQAGA
CCAPLRVRRRRLPFECDDGTSFTQDVEKPVECGCKECV
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgggagaggaggggatggagccgggtcaggaccgggccgggggacgccggcg
gtggcccctggtcgggctcctggccccgggctgtggaggatggtgctgtgggccggtgtg
gtgctgctggccggtggaggaggatgtgcggaggcgtgcccggctctgtgcagctgcctg
gggaacacggtggactgccacggcctggggatccactcggtgcccaagaacatcccccga
gggaccgagaggctggatctgaacggaaacaacctgacagtcatcaccaagacggacttc
tctggcctcaaacacctccgagttctacatctgatggagaaccagatcagtaacgtcgag
aggggggcgttcgatgagctgagggagctggaaagacttcgtctcaacaagaatcatctc
agtcagtttccagagctgctgttccagaagaacgaagctctgtctcgactggacctgagt
gaaaatggcatccaggctgttccgaggagagccttcagaggggccacggacctgaagaac
ctccagttggataaaaaccacatcagctgcatcgaggagggagctttcagagctctgcga
tctctggaggttctcacactgaacaacaacaacatcagcaccatcccagtctccagtttc
aaccacatgcccaagctccgcacctttcgtctccactccaactctctgcggtgcgactgc
cacctggcctggttgtctccgtggctgcggcagcggccggcgttaggcctctacacccag
tgcagctccccccccacgctgaggggcctcaacctggctgagctgcgcaagagtgacttc
gcctgctcgggccacggcggcagcgccttcgtccagccgtgcagtctggcgtccggctcc
tgtcctcccatgtgctcctgcagcaacaacatcgtggactgtcgggggcggggcctcacc
gccatccccgcccacctccccgaggccatgacggagattcgtctggagcagaacggcatc
aagtcagtcccccccggcgccttcacctcctacaagaaactcagaagaatagacctgagc
aacaaccagatttctgaaatcgctccagatgctttccacggcctccgagcgctcaactca
ctggttctgtacggcaacaagatcacggagctgccgggcggagtgttcgatgccctggct
tcactggagctgcttttgctgaacgcaaataagatccactgcatcagagcggctgtgttt
aaagatctggagaatctggctctgctgtcgctctacgacaacaagatccagagtctggct
aaagggaccttcagctccctgcacagcatccagaccctccacctggcccagaaccccttt
gtgtgtgactgtaacgtgaagtggttggccgacttcctgcgttcgaatcccatcgagacc
agcggcgcccgctgtgccagcccccgccgcctcgccaacaaacgcatcgcacagatcaag
agcaacaagttccgatgctccgccaaagagcagtaccacatcccaggcacagaggacagg
cgtcagagctatgagtgtaacagtaagccggtgtgtcccgctaagtgtcgctgtgaagcc
aacgtggtcgactgctccaacctccgtctcaccaagttccccgagcacctgccctcgtcc
accgaagagctgcgtctcaacaacaacgacctctcggtgctggaggccaccggcgccttc
aagggcctgacgcagctcaagaaaatcaacttgagcaacaacaagatctcagacatcgag
gacggagcgtttgacggggcgtcctcggcggtggagcttcacctcacggccaatcacctg
gagtctgtgagagggagcatgttcagagggatggagggactccgcatgctgatgctgagg
aacaacaagatcagctgtatccataacggcagcttcacgggtctcaccaacgtccggctc
ctctcgctgtacgacaaccagctgaggtccatcctgcccggggccttcgacacgctgccc
aacctgtccacgctgaacctgctggccaatcctttcacctgtgactgccgtctgtcctgg
tttggggcgtggcttcggagccggcgaatcgtgacggggaatcctcgctgccagggcccc
gccttcctccgggagatccccctgcaggacgtggctgtgctcgacttccgctgtgaagat
gggtcggtgctggacgacagccgctgtgtgtcggggcctcagtgtccgacccagtgcacc
tgcatggacacggtggtccgctgcagcaacaagcacctgcagggtctcccccgggggctg
ccacgcaacgtcaccgagctgtatctggatggaaaccagttcaccagtgttcccaaagac
ttggccaccttcaaatacctgcagctcgtagatctgagcaacaataaaatcagttccctg
tcggacgactccttctccaacatgagccagctcaccacgctaatcctcagctacaactcg
ctccgctgcatccctcctctgtcgctgagcggcctgcgctccctgaggctgctctctctc
catggcaacgacatctcggagctgcagcagggcatcttcagcgacgtgtcctcgttgtct
cacctagcgatcggagccaaccctctgtactgtgactgccggctgctctggctctcggac
tgggtgaagagcggctacaaggagccgggtatcgcccgctgtgccggccccggggacatg
gagggcaagctgctgctcaccacgcccgccgacaagttccagtgtctgggtcccgtggag
gcgtctgttcaggccaagtgcagcccgtgtgtgtcgtccccctgccagaaccagggcgtc
tgccaagtgcaacacacacaaccgtacacctgcacctgcaaggctggattcacgggtgaa
cactgtgagacaccggtggatgcttgtgtcagtaatccctgcactaacggaggaacctgc
ctgagcgacgagcagaccagaggcttcagctgcgcgtgtgcgttcggtttccacgccacg
ttctgcgaggtgaacgtggacgactgtcaggaccatggttgtgagaacggcgccacctgt
gtggacggagtcgggaactacacctgcttgtgttctcctgactacacaggtctgttttgt
gaagaagaggagggggggtgttctccggggagaaacccctgtcagcatcagtccacctgc
gtcagctcccccacaggctccaggtgtgtgtgtatccccggctgggtggggccggactgc
agtatagattataacgagtgtgtggatcatcgctgtcagaacggagctcagtgcgtcgac
catctggacggttacagctgcgtctgtcctcagggatacagtggacagttctgtgaggtg
gcccttgtccccccgtccccgtgccagctggctagttgtcagaacggcgccccctgcctg
gaggggacgggcacggccgagtgtcagtgcccccccggcttcgagggtcagagctgtgag
aagctggtgagcgtcaacttcgtggacagagactcgtacgtcgagcttcaagacgtcaag
aactggccccaggccaacatctccctgcaggtgtcgacagcagaggacaacggcatcctg
ctctataacggagacaatgaacctatcgctgttgagcttcatcagggtcacgtcagggtc
acgtatgatcccgggaaccagcctgcgaccactatttacagcactgagacggtgaacgac
gggcacttccacaccgtggagctggtgaccttcaaccggatggtgaacttgtcggtggac
ggaggagagccgaccactctggacagtcaggggcggagccagctggtgacgggggaggct
cctctgtacgtgggaggtttgccggagcaggcgatgccggcgtctctgggtctgtcctct
cagaccctcaacacgtccagcttccacggctgcatcaggaacctgtacatcaaccaggag
ctgcaggacttcacccgcagccacatgaagcccggcgtggtcccgggctgccaggcctgc
cgcaagctcctctgcctccacggcctgtgccgaccggacactgcgcagggtcctcagtgt
cactgtcagacaggctggacgggacaacactgtgaccagccaatcgcaggagcccttact
ggaccggaggttgtcgccaccgcaaccagcgtccacccgtgtgaaggcaacaagtgcgtg
agcggcgtgtgcaccgagctggacgcgcacacgtaccgctgcgactgccaggagggatat
cacggtgctctgtgcaacctgcagggggcgccagaggcgtcctgccagggtctgcagtgt
ctgcacggacagtgtgaggagacggagggggggcagcgctgcgtctgccaggagggattc
accggagagagctgcgccacagagtctccgtgtcgtggtgagccggtgagggatttccac
cggctgcagcgcggcaccgtcctctgccagacgtccaaaaccttctcctgggtggagtgt
cggggtcgatgccaggctggggccgggccgggggccgggccgggagccgggccgggagcc
gggccgggggccgggccgggggccaccggcgccccctgctgtgctcctctgagggtgcgg
cgccggcggctccccttcgagtgcgacgacgggacctcgttcacacaggacgtggagaag
cctgtggagtgtggctgcaaggagtgtgtgtgtatccccggctgggtggggccggactgc
agtatagattataacgagtgtgtggatcatcgctgtcagaacggagctcagtgcgtcgac
catctggacggttacagctgcgtctgtcctcagggatacaggtactgggaacactgggag
tgctgggaatgtcggagtggacagttctgtgaggtggcccttgtccccccgtccccgtgc
cagctggctagttgtcagaacggcgccccctgcctggaggggacgggcacggccgagtgt
cagtgcccccccggcttcgagggtcagagctgtgagaagctggtgagcgtcaacttcgtg
gacagagactcgtacgtcgagcttcaagacgtcaagaactggccccaggccaacatctcc
ctgcaggtgtcgacagcagaggacaacggcatcctgctctataacggagacaatgagcca
atcgctgttgagcttcatcagggtcacgtcagggtcacgtatgatcccgggaaccagcct
gcgaccactatttacagcactgagacggtgaacgacgggcacttccacaccgtggagctg
gtgaccttcaaccggatggtgaacttgtcggtggacggaggagagccgaccactctggac
agtcaggggcggagccagctggtgacgggggaggctcctctgtacgtgggaggtttgccg
gagcaggcgatgccggcgtctctgggtctgtcctctcagaccctcaacacgtccagcttc
cacggctgcatcaggaacctgtacatcaaccaggagctgcaggacttcacccgcagccac
atgaagcccggcgtggtcccgggctgccaggcctgccgcaagctcctctgcctccacggc
ctgtgccgaccggacaccgcgcagggtcctcagtgtcactgtcagacaggctggacggga
caacactgtgaccagccaatcgcaggagcccttactggaccggaggttgtcgccaccgca
accagcgtccacccgtgtgacggcaacaagtgcgtgagcggcgtgtgcaccgagctggac
gcgcacacgtaccgctgcgactgccaggagggatatcacggtgctctgtgcaacctgcag
ggggcgccagaggcgtcctgccagggtctgcagtgtctgcacggacagtgtgaggagacg
gagggggggcagcgctgcgtctgccaggagggattcaccggagagagctgcgccacagag
tctccgtgtcgtggtgagccggtgagggatttccaccggctgcagcgcggcaccgtcctc
tgccagacgtccaaaaccttctcctgggtggagtgtcggggtcgatgccaggctggggcc
tgctgtgctcctctgagggtgcggcgccggcggctccccttcgagtgcgacgacgggacc
tcgttcacacaggacgtggagaagcctgtggagtgtggctgcaaggagtgtgtgtag
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