Entry |
|
Name |
(RefSeq) actin, non-muscle 6.2
|
KO |
|
Organism |
pplt Pleuronectes platessa (European plaice)
|
Pathway |
pplt05100 | Bacterial invasion of epithelial cells |
|
Brite |
KEGG Orthology (KO) [BR:pplt00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128438045
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128438045
09143 Cell growth and death
04210 Apoptosis
128438045
09144 Cellular community - eukaryotes
04510 Focal adhesion
128438045
04520 Adherens junction
128438045
04530 Tight junction
128438045
09142 Cell motility
04814 Motor proteins
128438045
04820 Cytoskeleton in muscle cells
128438045
04810 Regulation of actin cytoskeleton
128438045
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128438045
05100 Bacterial invasion of epithelial cells
128438045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pplt03021]
128438045
03019 Messenger RNA biogenesis [BR:pplt03019]
128438045
03036 Chromosome and associated proteins [BR:pplt03036]
128438045
03029 Mitochondrial biogenesis [BR:pplt03029]
128438045
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:pplt04812]
128438045
04147 Exosome [BR:pplt04147]
128438045
Transcription machinery [BR:pplt03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128438045
Messenger RNA biogenesis [BR:pplt03019]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
128438045
Chromosome and associated proteins [BR:pplt03036]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
128438045
NuA4 complex
128438045
Chromatin remodeling factors
BAF complex
128438045
PBAF complex
128438045
GBAF(ncBAF) complex
128438045
SWR1 complex
128438045
Mitochondrial biogenesis [BR:pplt03029]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
128438045
Cytoskeleton proteins [BR:pplt04812]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
128438045
Exosome [BR:pplt04147]
Exosomal proteins
Proteins found in most exosomes
128438045
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4:30400248..30404055
|
AA seq |
375 aa
MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNCPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMQTAASSSTLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF |
NT seq |
1128 nt +upstreamnt +downstreamnt
atggaagaggaaatcgctgccctcgttgttgacaacggctccggcatgtgcaaggccggc
ttcgccggggacgacgccccccgcgctgtgttcccgtccatcgtgggccgccccagacac
cagggcgtgatggtgggaatgggacagaaggacagctacgtgggagacgaggctcagagc
aagagaggcatcctgaccctgaagtatcccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctccgtgttgctcctgaggag
catccagtcctgctgaccgaggctcccctcaaccccaaggccaacagggagaagatgact
cagatcatgttcgagaccttcaactgtccggccatgtatgtggccatccaggccgtcctg
tcactgtacgcctccggtcgtaccacaggtatcgtgatggactctggtgacggtgtcagc
cacactgttcccatctacgagggctacgctctgcctcacgccatcctccgtctggacctg
gctggccgagatctgactgactacctgatgaagatcctcaccgagcgaggctacagcttc
accaccaccgccgagcgtgagattgtgcgtgacatcaaggagaagctcagctacgtggct
ctggactttgagcaggagatgcagacagcggccagctcctccaccctggagaagagctac
gagcttcctgacggacaggtcatcaccatcgggaacgagaggttccgctgcccggaggcg
ctcttccagccgtcgttcctcggaatggagtcgtccggcatccacgagacgacttacaac
agcatcatgaagtgcgacgtggacatccgtaaggacctgtacgccaacactgtgctgtcc
ggcggcaccaccatgttccccggcatcgctgaccgcatgcagaaggagatcactgccctg
gcccctcccaccatgaaaatcaagatcatcgctcctccagagaggaagtactcggtctgg
atcggtggctccatcctggcctccctctccacgttccagcagatgtggatcagcaagcag
gagtacgacgagtccggccccagcatcgtccaccgcaagtgcttctag |