Pleuronectes platessa (European plaice): 128440071
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Entry
128440071 CDS
T09923
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pplt04040
]
128440071 (trpc6b)
Ion channels [BR:
pplt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128440071 (trpc6b)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
128440071
NCBI-ProteinID:
XP_053278623
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Position
5:complement(4144011..4155182)
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AA seq
853 aa
AA seq
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MMLRPAVSRPRRPAVRGAGYLLHCQSSSFLSMTEELFLDAAEYGNVPEVRRMLEELPHLN
VNCVNYMGQSALQLAVANEHLEVTKLLLRKKDLARVGDALLLAISKGYIRIVEAILGHQA
FADSERLTDSPGQAESHDDFFAYDEDGTRFSHDITPIILASQSNEYEIVHILLSKGARIE
RPHDYFCQCRACNQQQRHDAFSHSLSRINAYKGLASPAYLSLSNEDPVMAALELSNELAV
LANIEKEFKVGSLIKHVAGYDMILWCYRFFLSLLQNDYNKLSMQCKDFVVGLLDLCRSTE
EVEAILNGDRDSCQSHESFGKQNHIRLKLALKYEVKKFVAHPNCQQQLLYIWYENFSGLR
QQNTAVKVLLVLGVAVGLPILAFMYWIAPSSKLGKLMRGPFLKFVAHAASFMIFLCLLVL
NAADRFGGTSLLPNMTVHDHPAQLFRMKTTPFTWMEILIISWVIGKIWEECKDIWSQDIR
EYISEPWNLLDFSILAIFMTSFIARLMAFWHAYSAQCYVDKHFTDLSNMSLPSDIQYFQL
ARINWMPSDPQLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVVF
ITVFVAFMVGMFNLYSYYLGAKHNDAFTTLEESFKTLFWAIFGLSEVKSVVLNIDHKFIE
NTGYVLFGVYNIIMVIVLLNMLIAMFNSSFQEIQSDADVEWKFARAKLWFSYFEHGVTLP
VPFNLVPSPKSVVSLLLGIRGFLRPAPRGKIKESSNDETELNKLRQQEDLSVAASVCPTH
HQQIMNRLVKRYIVKAQTDKDNDEVKEGELKDIKQDISSLRYELLERQSQDTEMLAELIG
QLGDVMRDQQKEE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgcgtccggctgtgtcccgcccccgtagacccgctgtaagaggagccggttac
ctcctccattgccagtcctcctccttcctctccatgacagaggaacttttcttagatgca
gcagaatatggcaacgtccctgaagtgaggcggatgctggaggagcttccacacctcaac
gtcaactgcgtgaactacatgggccagagtgcattgcagctggctgtggccaacgagcat
ctagaggtgaccaagctcctgctgaggaagaaggacctcgctagagtgggcgatgctttg
ctgttggccatcagcaaaggctacatccgcatcgtggaggccatcctgggtcaccaggcc
tttgccgacagtgagagactcaccgacagcccgggccaggcggagtctcacgacgacttc
tttgcctatgacgaggacggcacacgtttctctcacgacatcactcccatcatcctggcg
tcccagagcaacgagtatgagatcgtgcacatactcctgtcgaagggcgcccgcatagag
cggcctcacgactacttctgtcagtgcagagcctgcaaccagcagcagagacacgacgcc
ttcagccattccctatccaggatcaatgcttacaaaggtctggccagtccggcgtatctg
tcgctgtccaacgaggacccggtgatggcagcgctggagctgagcaacgagctcgctgtc
ctggcaaacattgagaaggagttcaaggtaggatcattgattaaacacgttgcaggctat
gacatgattctatggtgctacagatttttcctttctctgttgcagaacgattacaacaaa
ctgtccatgcagtgcaaagactttgtggtcggactcctggatttgtgtcggagcaccgag
gaagtggaggccatcttaaacggggaccgcgactcgtgtcaaagccacgagtccttcggc
aaacaaaaccacatccggttgaaactcgctctgaagtatgaagttaaaaagtttgtagct
catcccaactgccagcagcagctcctctacatctggtacgagaacttctccggactccgt
cagcagaacacagcggttaaggtgctactggtcctgggtgtagcagtcgggctgcccatc
ctggccttcatgtactggatcgcaccttccagtaagttggggaagctcatgcgtggaccc
ttcctgaagttcgtggcccacgctgcttccttcatgattttcctctgcctgctggtcctg
aacgccgccgaccgcttcgggggaacgtcgctgctgcccaacatgaccgtccacgaccac
ccggcacagctgttccgcatgaagaccacccccttcacctggatggagatcctcatcata
tcttgggtcatagggaagatctgggaggaatgtaaagacatttggtcgcaggatatccgg
gagtacatctccgaaccctggaaccttctggacttcagcattttggccattttcatgacg
tctttcatcgccaggttgatggcgttctggcacgcgtattctgctcagtgttacgttgac
aagcacttcaccgacctgtccaacatgagcctgccctccgacatacaatactttcagctg
gctcggatcaactggatgccctcggacccgcagctcatctccgaaggcctctatgccatc
gcggtcgtgctgagcttctctcgcatcgcctacatcctgccggccaacgagagcttcggg
ccgctgcagatctctctgggacgcacagtgaaagacatctttaagttcatggtggtcttc
atcacggtgtttgtggctttcatggtgggaatgttcaacctgtactcgtactacctcgga
gccaagcacaacgatgcgttcacaacactcgaggagagcttcaaaaccttattctgggcc
atcttcggtttgtctgaagtgaagtcggtggtcctgaacatcgaccacaagttcattgag
aacaccggctacgtcctgttcggggtgtacaacatcatcatggtgattgtgctgctgaac
atgctcatcgccatgttcaacagctccttccaggaaatacagagcgacgctgacgtcgag
tggaagttcgctcgagccaaactctggttctcgtactttgagcacggcgtcacgctgccc
gtgcccttcaacctggttcccagccccaagtcggtcgtctccctcctgctggggatcaga
ggattcctccgtcctgcacctcgaggcaaaatcaaagagagttcaaacgatgagacggag
ctcaacaagttgaggcaacaggaggatctgagtgtggcagcgtcagtttgtccgactcac
catcagcagataatgaaccgcctcgtcaagagatacatcgtgaaagcacaaacggataaa
gacaacgacgaagtgaaagagggtgagctgaaagacataaagcaggacatctccagtctg
cgctacgagctgctggagaggcagagccaggacacggagatgctggctgagctcatcggg
caactgggagacgtcatgcgtgatcagcagaaagaagagtag
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