Pleuronectes platessa (European plaice): 128444324
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Entry
128444324 CDS
T09923
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128444324 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128444324 (tdg.1)
Enzymes [BR:
pplt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
128444324 (tdg.1)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128444324 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
128444324
NCBI-ProteinID:
XP_053282698
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Position
7:complement(21138041..21147113)
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AA seq
451 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLHQWVQSAQQFHALQAQYSGINHNQQFHYSDTQTGDAAMANMAN
QEPMMDLPEPASLAKAPAKKRGRPAQPKAPKPPKIPKAPKPPKEPKAPKVPKAKPGPKPK
KGAEAPADGKQEKIDESFKKVKRKVDRFKGMTEEEVMKKTLPDLLDYNLDYVIIGINPGL
MAAYIGRYFPGGGNHFWKCLFLSGFTEELLNHNSDTSLPVKYKMGFTNMVERATPGSKDL
STKELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCREMYGKKPKKLDFGLQPHTIPDCD
VALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGVKKSTEVEEVDYAFDLKLAKED
AKRMAIKEENYDPGYEDAYGGAYAERGPEEGPAQPQTNGHCTFSTAENTEGAQEASTSQI
AVGQLPDGQWMTQSFADQIPDIDGGVKDASA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgaatggatcactgcctgttgtgtccccggagtatcttcatcagtgg
gttcagtctgctcagcagttccacgctctacaggcgcaatattcaggcatcaaccacaac
caacagtttcactactcggatacacagacgggggacgcagccatggccaacatggctaat
caagagcccatgatggatctaccagaacctgctagccttgcaaaagctccagccaaaaag
agaggcagaccagcccaacccaaggcacccaagccaccgaaaatacctaaggcaccaaag
ccgcctaaagaaccaaaagcgcctaaagtacctaaagcaaaacccggccctaagccaaag
aagggcgccgaggctccagcagacggcaaacaggagaagatagatgagagcttcaagaag
gtgaagcgaaaagttgaccgcttcaagggaatgacagaagaggaagtcatgaaaaaaact
ctaccagacctgctggattacaacctagactatgtcattattggtatcaatccagggctg
atggcagcttacattggacgttattttcctggcgggggaaatcatttttggaagtgcctg
tttctgtccggatttactgaggagctgctcaaccacaatagcgacaccagcctgcctgtc
aagtacaagatgggcttcacaaacatggtggagcgggcaacaccagggagcaaagacctc
tcaactaaagagttacgtgaaggaggcaaaattctcgtagagaagttgaagaaatacaag
cctcttattgctgttttcaatggaaaatgcatctatgaaatgttctgcagagagatgtat
ggtaaaaaaccaaagaaacttgactttggtttgcaaccacacacgatcccagactgtgac
gtggctctgtatctgatgccttcctccagtgctcgttgcgctcagttccctcgtgctcag
gacaaagtgcacttctacatcaagctgagggagctccgcgatcagctgaagggcgtcaaa
aaaagcacagaggttgaggaggttgactacgcatttgatctgaagctggctaaagaggat
gccaagaggatggcgataaaggaggagaactatgaccctggttatgaagatgcttatggc
ggagcatatgcagagagaggacctgaagagggcccggcccagccccagaccaatggtcac
tgtactttctcgactgcagaaaacacagaaggagcacaggaggcgagcacatcacaaata
gcagtgggccagcttccagacggacagtggatgacccagtccttcgctgatcagatcccg
gacatcgatggtggcgtgaaagacgccagcgcatga
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