Pleuronectes platessa (European plaice): 128445521
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Entry
128445521 CDS
T09923
Name
(RefSeq) protocadherin gamma-C5 isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pplt04515
]
128445521
Cell adhesion molecules [BR:
pplt04515
]
Cadherins
Protocadherins
128445521
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Bact_surface_Ig-like
Motif
Other DBs
NCBI-GeneID:
128445521
NCBI-ProteinID:
XP_053284242
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All DBs
Position
8:complement(17782545..18031310)
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AA seq
971 aa
AA seq
DB search
MDSGQRRRSRGGRLWSICLYLAGLSCASAQLSYSVSEELSPGSFVGNIAKDLGLTAQRID
QRRLRVLSDSSAKYFEVKQATGDLVIKQSIDREQMCQLSLTCTLNLQIVLDDPLESHRVV
VDILDVNDNAPHFPTSNISLEISEAAAPGTRFRLESAHDPDVGTNSLRTYHLAANDFFTL
NVETKSDGSKFPELVVDKPLDRETLAKFRLMLTAVDGGQPEKSGSTLMLIKVLDVNDNAP
VFDEPVNKVRLLENVALGTLITKLNATDADSGNNGEISYLFSKYTPEGVLRLFSVDSKSG
EIRVKGHVDYEKATAYHITVQARDGGSPAMEGSCNVLVDIVDVNDNAPEVTLTSLTSPIR
EDSAPETVIALISARDLDSGVNGEVTLTVQPGLPFKLIPAFGMHYSLITAGNLDRETVPE
YTVVIRATDTGSPRLSSHITFVVELSDVNDNAPTFSQGKYSVDIPESNAPSTPIAAVSAT
DPDLGDNARISYSILPSMVQGSPIASYVYINQDNGHIYSMRSLDHEQLNAFRIEVQARDA
GVPPRTANVTVHVFVVDVNDNAPVIVYPPYPKEKGLQLTVPPSAGPGHLINKLVGVDADS
GHNAWLFYSIAPGPNAGMFRIGPHTGELRTARKWAEEEEGSAYDILVIIQDNGEPPKSCS
VNITVTVDEKSTAVDAPASPRHTPFYHRTGMSDITLYLIISLACVSAVSFITFVALMIRC
LRHRSPGLGDSDCCCYDSHRSSRYHQRPSKDLHLQLNSDGPIRYMEVVGGSQDPNTRTYR
PCYSTLSSRSDFVFMKTPMLSQNNTLNMTLSRKHLMNSVNEQKPPNNDWRFTQGQRPGPS
GATGGPEVAMGTGPWPQPPTEAEQLQALMAAANEVSEATGTLGPGTMGLSTRYSPQFTLQ
HVPDYRQNVYIPGSTATLTSNPQQQQQQQQATAQQAAQQALPPPQASAQPEPPKAAQTPA
SKKKSTKKEKK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggactccgggcagaggagacgctccagaggagggaggctgtggagcatttgcttgtat
ctcgccggcctctcctgcgcgtccgctcagctcagttattccgtatcggaggaactaagc
ccgggctccttcgttgggaatatcgcaaaagacttgggtctgactgcccagcggattgac
cagaggaggctgcgggtgttgtcggattcctcagctaagtacttcgaggtgaaacaggcg
accggcgatttggtcatcaaacaaagtatagaccgggagcagatgtgccaactgagttta
acgtgtacgctcaaccttcaaatagttctcgatgatccattagagagccatcgcgtcgtg
gtggacattctggatgtgaatgacaatgcgccccactttccgaccagcaacatttctttg
gagatatcagaggcggccgcgccgggcacaaggttccgcttggaaagcgcgcacgacccg
gacgtggggaccaactcgttacgcacgtaccatctcgcagcaaatgactttttcactttg
aacgtggaaactaaaagcgacggcagtaagtttccagagctcgtggtggataaacctctg
gacagggagacgctggcaaagtttcgcctgatgctcacagctgtagacgggggacagccg
gagaaatctggctcaaccctgatgctcattaaagttctggatgtaaatgacaatgcgccc
gtctttgacgaaccagtgaataaagttagactattagaaaatgttgcactgggcacttta
atcacaaagttgaacgcaactgacgcggattccggcaacaatggagaaatctcttatctt
tttagtaaatatacgccggagggggttctccgacttttcagtgtggattctaaaagcggg
gagatccgtgtgaagggccatgtggactatgagaaggccactgcgtaccacatcacagtg
caggccagagatgggggctctcctgccatggagggctcatgtaacgtcctagtggacatt
gttgatgtgaatgacaacgcaccagaggtcacgctgacgtcactgaccagtcctattaga
gaggactcggcaccagagacagtcatagcgctcataagtgcccgggacctggactcaggt
gtgaatggagaggttacattgactgtccaaccaggtttgccttttaaacttattccagcc
tttggcatgcattacagcctcatcacagctggcaacctggaccgtgagactgtcccagag
tacacagtggtcatcagggccactgacacgggttcaccacgcctttcatcacatatcacc
tttgtggtggagctctctgatgtgaatgacaatgctccaactttctctcagggtaaatac
tctgtggacatccctgagagcaacgctcccagtacccccatcgcagctgtttcagccact
gacccagacctcggggacaacgctcgcatatcgtactccatccttcccagcatggtccag
ggctcacccattgcttcttatgtctacattaaccaagataatggtcacatctacagcatg
cgctctctggatcatgagcagctcaatgcattccgtattgaggtgcaggcccgggatgct
ggggtgcccccacggaccgccaatgtcactgtgcatgtgtttgtggtggatgtgaatgac
aatgcaccagtgattgtatatcccccctaccctaaagagaaaggattacagctcactgtg
cccccatctgcaggcccagggcacctcataaataaacttgtaggggtggatgcagacagt
gggcacaatgcatggctgttttactccatagccccgggaccaaatgctggaatgtttcgt
attgggccacacacaggtgagctccgcacagcccgcaaatgggccgaggaggaagagggc
tccgcctatgacattttggttatcattcaggacaatggtgaaccgcccaagtcttgttct
gtgaacattacagtaaccgtggatgagaagagcacagccgttgacgcaccggcaagccct
cgccacacgcccttttaccaccgcacagggatgtcagacatcaccttgtaccttatcatc
tctctagcctgtgtatcagctgtctcctttatcacctttgttgccctcatgatacgctgc
ctgaggcaccggagcccgggcctgggagactccgactgctgctgttacgacagccacagg
tccagccgctaccaccagaggcccagcaaggacctgcacctgcagctcaacagtgatgga
cctatacgctacatggaggttgtgggaggctcccaggatccaaacactcgcacttacagg
ccgtgctactccaccctatccagccggagtgactttgtatttatgaagacaccaatgctg
agtcaaaacaacacactcaacatgacactcagcaggaagcaccttatgaactcagtcaat
gagcaaaaaccccccaacaatgactggcgcttcacccaaggacagcgacctggacccagc
ggggcaactggaggacctgaggttgccatgggaactggtccctggccccagccccctact
gaggctgagcagctccaggccctgatggctgcagcgaacgaagtgagtgaggctacaggc
accctggggcctggcaccatgggccttagcacccgctacagcccccagttcactctgcag
cacgtccccgactaccgccagaacgtctacatccccgggagcaccgccaccctcacctcc
aacccccagcagcagcagcagcagcagcaggccaccgcccagcaggccgcccagcaggcc
cttcctccaccccaggcctcggcccagcccgagccccccaaggccgcccagacccctgcc
tccaagaagaagtccaccaagaaggagaagaagtag
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