Pleuronectes platessa (European plaice): 128445858
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Entry
128445858 CDS
T09923
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128445858 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128445858 (kdm2ab)
04121 Ubiquitin system [BR:
pplt04121
]
128445858 (kdm2ab)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128445858 (kdm2ab)
Enzymes [BR:
pplt01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
128445858 (kdm2ab)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
128445858 (kdm2ab)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128445858 (kdm2ab)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128445858 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
128445858 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
F-box
LRR_6
SR-25
Cupin_8
Cupin_1
C1_1
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
128445858
NCBI-ProteinID:
XP_053284705
LinkDB
All DBs
Position
8:complement(16842125..16855730)
Genome browser
AA seq
1302 aa
AA seq
DB search
MADPHTRYSKRLRTGTRRRYQDDGISDDEIEGKRMFDLDEKLQCDRFRSDLVKHMDGKDF
TFEYIQREGLREPIIFKTAEGLGLQMPDPDFSVSDVKLFVGSRRIVDVMDVNTQKGIEMS
MAQWRRYYETPPSEREKLYNVISLEFSHTRLENLVKRPASVDLIDWVDNMWPRHLKERQR
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGGKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRIQLNQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTKISHLTPEFQKYSLGKG
LTRADVEANDPPGNGNSNGIDTETENAEITLKQQKEEEEEDTEEDGAAQLTTPQHLMTPF
ELEGLCNLLGKLEELPDHKKCVPAGIQDAAALLEDMRAVLKEHSNDNPKLSYTGEPIVKW
PKRPSWYEPSTPPPPVIYRPRLAPNLHKPLGQQPIRRFSLSALRRRRVRCKRCAGCCRKE
CGNCQYCHDMRKFGGPGRMKKGCLTRQCITPALPNTARCAICREGELDESDPSTFSLMEC
SVCSQIAHRQCIKEPGEGKINDDLPSCWECPKCCQGKGSGSESSSDEDSGESESSSSLPP
SKLAYREGIGVSDEVRRGERTGPQSRPTAPPPSQKLLLQHQQNRKRASALELRLKKKIKL
ERSKLLVKQSALDRSPRLLSSRLLSRLRSPTSRLSQGRGLHHGSPGRTHSVLQQQSSRSL
VPESKGEPRRERGRGVRLRGGGAGRGSGGGRVHGDLQEESEDSSSSSSSSTSSSSSSSSD
EEEEREQNSGRGGDKENQPQSRRGQAAKEEEEASEVANQNGPEDEDEEEIEQNSQTGDKD
GSYLKVTLQRPTKTKRDTSTIVPKLEAIAPQAAASTLNNQTRPLARPPIRIRGPCPDQFS
NGHTPPHTRIGHTDSRTSHSERLEVSKRQRPNRPAKLSNGASCSSSSELTHLRIPLSALQ
EGGSETDRESGLSGPGCEREVWVSVFRYLSRADLCICMAVSKNWYKWCLDKRLWARIDLS
IKRTVTPQALTGIIKRQPVTLDLSWTNISKKQLNWLVGRLPGLKDLMVAGCSWSSISALC
SSGCPLLRSLDLRYADGVKDSQIRDLVSPPGCDNRSQLRTMQCLRLAGLDITDSTLRLVI
RHMPHLTKLDLSHCNSLSDHSINLLTAVGSSTRNTLTELNLGGCSKLTDTCLKYLRRLSC
ISLLDLRGCEGVSRKACEAFISELSVNTLYCLSDEKLIQRIS
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctcatacgcggtacagcaaacgcctgcgtacaggcacgcggcgccgctac
caggacgatggaatctcagatgatgaaattgaagggaaacgaatgtttgacctggatgaa
aagttgcagtgcgaccgttttcggtcagatttggtcaaacacatggacggcaaagatttc
acatttgaatacatccagagggaagggctcagggaaccaatcatctttaagacagctgaa
ggtcttggtctacaaatgccagaccctgatttcagtgtgagtgatgtcaagctgtttgta
ggtagtcgacgaatcgtagatgtgatggacgtgaacactcagaagggaatcgagatgtca
atggctcagtggcgacgctactatgagacgccaccatcagaaagagaaaaactctacaat
gtcatcagcctggagttcagccacaccaggctggagaatctagtcaaacgtccggcttcg
gttgaccttattgactgggtggacaacatgtggccgcgtcatctcaaggagagacaaaga
gactccacaaacgccatcatagacatgcactatcccaaagtacagaagtattgtctcatg
agtgtgcaaggctgcttcacagatttccacattgactttggaggcacttcagtctggtac
cacatcctgcgaggaggaaaggtgttctggctgattccacccacaccacagaacctggag
atgtatgagaactgggttttatcaggaaaacagggagatatcttcttgggggacaagtgt
catgactgtcagaggatacaactcaaccagggcaacaccttcataatcccatcagggtgg
atccatgctgtgtacacgccagaggacacgttggtgtttgggggaaatttcctccacagc
tttaacatcccgatgcagctcaacatctacagcattgaggatcgcacacgggtgccagca
aagttccgttaccctttctactatgagatgtgctggtatgtcctggagagatacctctac
tgtctgacaaagatctcccacctcacacctgagttccaaaaatactcccttggcaaagga
ctgacacgggctgacgttgaagcaaacgatcctcctgggaatggcaactccaatggaatt
gacactgaaactgaaaatgcggagatcacattaaaacaacaaaaagaggaagaagaagaa
gatacagaagaagatggagcagctcaacttaccacaccacagcatttgatgaccccattt
gagctggagggactgtgcaacctcttggggaaactggaggagttgccagaccacaaaaag
tgtgtccctgcaggtatccaggatgctgcagccctgctcgaggacatgagggctgttctg
aaggagcattcaaacgataaccccaagctgtcctacactggagagccgattgtcaagtgg
ccaaaaagaccgtcctggtacgagccctccactcctcctccccctgtcatttaccgtcct
cgcttggccccaaacctccacaagcctcttggtcagcagcccatcagacgcttctccctc
tctgccctgaggagaagacgggtgcggtgcaagcgctgtgccggctgctgcagaaaggag
tgcggcaactgccagtactgccacgacatgaggaagtttggtgggcctggacgcatgaag
aagggctgcctcacgagacagtgtataacgcctgctttgccaaacacagctcgatgtgcc
atatgtagagaaggtgaattagatgagtcggatccgagcactttctcactcatggagtgc
tccgtctgctcacagattgctcatcgtcaatgcattaaggaacctggtgagggaaagatc
aacgacgatttacccagttgctgggaatgtcccaaatgttgtcaaggcaaaggttcagga
tcagagtcttccagcgatgaggatagtggggagtcagagagctcatcgtcgttgccacca
tccaaacttgcgtaccgggaaggcattggtgtcagcgatgaggtgagacgaggggagcgt
accggaccacaatcccgacccacagcaccaccaccttctcagaaactcttactgcagcat
caacagaatcgcaaaagagctagtgccctggagcttagacttaagaagaagataaaactg
gagcgtagcaagctcttagtgaaacagtcagcactagatcgttctcctaggctgctgagc
tccaggctgctgtccaggctgcgctctccaaccagcagactatctcagggcagaggtctt
caccacggctctccaggaaggacccattccgtcctccagcagcagtcttcccgcagtctg
gtacctgagtctaagggagagccccgcagagagaggggaagaggggtcaggctgcgggga
ggaggagcaggaagaggttctggaggtggcagagttcatggagacttgcaggaggagagt
gaggacagcagcagcagcagcagtagctccaccagcagcagcagcagcagcagcagcgac
gaggaagaggagagggagcagaacagtgggaggggaggggacaaagagaaccagcctcag
tcaagaagaggacaagcagccaaagaagaagaggaagcgagcgaggtggccaaccaaaac
ggtccagaggatgaagatgaggaggagattgagcaaaacagtcaaacaggggacaaagat
ggctcatatcttaaagtgacactccaaaggccaaccaagaccaagcgggacacatcaacc
attgtccccaagctagaggctatcgcccctcaagctgctgcttccacattaaacaatcag
actagacccctcgccagacccccaattagaattcgcggcccctgtcctgatcaattctcc
aatggacacacacccccacatactcgtattggacacacagactctcgcacatcccactca
gagaggctggaggtctctaaaagacagaggccaaacaggccagctaaactgagcaatggt
gcttcctgttcttcatcctcagagcttacccatctccgcatccctctttccgccctgcag
gagggagggagtgaaacagaccgggagagcggtcttagtgggccgggttgtgagagggag
gtgtgggtgtctgtcttccgctacttaagtcgagcagatctctgcatctgcatggctgtc
agcaagaactggtacaaatggtgtttagacaagcggctttgggcgcggattgacctgagc
atcaagcgcactgttactcctcaggccctaacaggcatcatcaagagacagcctgtgacg
ctcgatctgtcatggaccaacatctctaaaaagcagctcaactggcttgttggacgcctg
cctgggcttaaggatctgatggtggcaggctgttcctggtcatctatatcagctctctgc
tcctctggttgccctctcctccggtctctggacctgcggtacgcagacggggtcaaagac
tctcagatcagggatcttgtcagccctccaggctgcgacaatcgcagtcagttgcggacc
atgcagtgtttacgactagcaggcctggacatcactgactccactctgcgcctggtgatt
cgccacatgccccatttaactaaactggacctctcccactgcaacagcctcagtgaccac
tccatcaacctgctcacagcagtgggctcctccacccggaacacgctgacagaactcaac
cttggaggctgcagtaaactgaccgacacgtgtctaaagtatctccgccgcctctcttgc
atctcactgcttgatctgcgaggctgcgaaggggtctcccgcaaggcctgtgaggccttc
atctccgagctgtccgtcaacacgctctactgcctatcggatgaaaaactgatccagagg
atatcctaa
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