Pleuronectes platessa (European plaice): 128450547 Help Entry 128450547         CDS       T09923                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pplt  Pleuronectes platessa (European plaice) Pathway pplt04010   MAPK signaling pathway pplt04120   Ubiquitin mediated proteolysis pplt04140   Autophagy - animal pplt04144   Endocytosis pplt04517   IgSF CAM signaling pplt04620   Toll-like receptor signaling pathway pplt04621   NOD-like receptor signaling pathway pplt04622   RIG-I-like receptor signaling pathway pplt05132   Salmonella infection pplt05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pplt00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     128450547 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     128450547 (traf6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     128450547 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     128450547 (traf6)    04140 Autophagy - animal     128450547 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     128450547 (traf6)    04621 NOD-like receptor signaling pathway     128450547 (traf6)    04622 RIG-I-like receptor signaling pathway     128450547 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     128450547 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     128450547 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pplt04131]     128450547 (traf6)    04121 Ubiquitin system [BR:pplt04121]     128450547 (traf6) Enzymes [BR:pplt01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      128450547 (traf6) Membrane trafficking [BR:pplt04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     128450547 (traf6) Ubiquitin system [BR:pplt04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     128450547 (traf6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 TRAF6_Z2 U-box zf-RING_5 RING_XB3-XBAT31 zf-RING_11 TRAF3_RING BLI1 CEP104_ZnF DUF7310 Motif Other DBs NCBI-GeneID:  128450547 NCBI-ProteinID:  XP_053290086 LinkDB All DBs Position 1:complement(28776244..28783639) Genome browser AA seq 574 aa AA seqDB search MACYDANKGSLEEDSCDGPVGGEMSDCGLAMLEIERESLFFSPVETFGNLTLGNSASLQA DMPMQGYDVEFDPPLESKYECPICLMALRNAVQTPCGHRFCKNCIEKSIRDTGQRCPVDN EMLTEDQLFPDNFAKREILSLTVRCPNSGCVDEMELRNLENHLAQCQFATETCPQCQQSV RKSHLEEHTTVECQRRPVSCPDCVECFVFEESELHQQQCPFASVNCQYCGMDLIRDQIES HCDTDCTKAPIACNFSTFGCKERMQRHDLAQHMQEFTQMHMWYMAEFLRGLSLNGNTPKA LWASGPSVSSEDQGAAASLSSSGGLKGAAGGGGGNCASATQPNEEMQRLREMDGRLVKQD HRLVELSILKETHAGQLAELRNRVSMLEDTVKELEAQQCRGIFIWRLKGFSAHMRNQEAG LAVVEHSPGFYTGYPGYKLCLRLHLQTPNAQRCSNYISLFVHTMQGAFDGELTWPFQGTI RLAILDQGLEGQHHVEVMETKPDLQAFQKPTIQRNPKGFGYVTFMHLHQLKQRAYVKDDT LLIRCDVTSRFDNMPNREGPAVQPRGPEASVSRD NT seq 1725 nt NT seq  +upstreamnt  +downstreamnt atggcctgctatgatgccaacaaggggagtctggaggaggacagctgcgatggacctgtt ggtggagagatgtctgattgtggcttggcgatgctggaaatagagcgagaatcccttttt ttcagcccagtagagacgtttggcaacctcacccttggcaactccgccagtcttcaggct gatatgcccatgcagggctacgacgtggagtttgacccgcccctggagagtaaatatgag tgtcctatctgcctcatggctctcaggaacgctgttcaaacaccctgcggtcaccgtttc tgcaagaactgcattgagaaatccattcgtgacacgggacagagatgccccgtggacaac gaaatgctgacagaagatcagctgtttcctgataactttgccaaacgagagattctatcg ctaactgttcgctgtccaaactctggttgtgttgatgaaatggagcttcgaaacttggag aatcatttggcgcagtgtcagtttgcgactgagacttgtccacagtgccagcagtcggtg agaaagagccacttagaggagcacaccactgtggagtgccagaggaggcctgtgtcctgc cctgattgtgtggaatgcttcgtctttgaggagagcgagcttcaccagcagcagtgtccc tttgctagcgtgaactgtcagtactgtggcatggatctcatcagagaccagattgaatct cattgtgacacagattgcacaaaggcccccatcgcctgtaacttcagcacctttggatgt aaggaaaggatgcagcgccatgacctggctcagcacatgcaggagttcacgcagatgcac atgtggtacatggctgagttcctgcgtggccttagcctcaatggcaacacgcccaaagcc ctgtgggcgagtggaccgtctgtctcttccgaggatcaaggagctgcagcatcactatct tcctctggagggctcaaaggagctgcaggcggcggtggtggcaactgtgcttcggcaact cagccaaatgaagagatgcagcggctcagagagatggacggacgattggtgaagcaggat catcggctagttgagctctccatcttaaaggaaacacatgcaggtcagcttgcagagctc cggaatagggtgtcaatgctggaggacacggtgaaggagctggaggcccagcagtgccgc ggtatcttcatctggcgcctcaaaggtttctctgcccacatgcggaaccaagaagctgga ctcgcggtggtcgagcacagccctggcttctacacgggctacccgggctacaagctgtgc ctgcgtttacacctgcagacgcccaacgcccagcgctgctccaactacatctccctcttt gtccacaccatgcagggagcttttgacggggagctgacctggccgttccaaggcaccatc cggctcgccatcctcgaccagggccttgagggtcagcaccacgtggaggtgatggaaacc aaaccagacctgcaggcctttcagaagcccaccatccagcgcaatcccaaaggatttggc tacgttaccttcatgcacctgcatcagctgaaacagagagcctatgtcaaagatgacacc ttacttatccgctgcgatgtgacgtcgcgttttgacaatatgccgaatcgtgaggggccg gcggtgcagcctcgagggcccgaggcatcggtttcaagggactaa

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