Pleuronectes platessa (European plaice): 128451220
Help
Entry
128451220 CDS
T09923
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128451220 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128451220 (c9orf72)
Membrane trafficking [BR:
pplt04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
128451220 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
128451220
NCBI-ProteinID:
XP_053290998
LinkDB
All DBs
Position
11:21951617..21963976
Genome browser
AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKSEVAVEGECPLQAATFAYWDNILGPRVRHIWSPKGDQLMYLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHAIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKSHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCVFLTPAE
RKCSRLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHMYNQRRYMRSELSTLWKTDSEEDIPPETVIHTDESFTPDLNIFQDVMHNDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKSLTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLSIIMALAEKLRAGLHSFVFGKPFYTSMQERDVLMTL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggctgtcctccccagtcacctgctgtggcaaagtctgaagttgcagtagag
ggagaatgtccgttgcaggctgccacctttgcctactgggacaacatcctgggcccgcgg
gtgcgacacatctggtcaccgaagggtgaccaactgatgtacctcagtgatggagaggtc
acctttctggccaatcacactcttaatggggagattctccgcagtgctgagtgcggcgcc
gtggatgtgaagttcttcgtcctggcggaaaagggcgtcatcattgtgtccctcatcttt
gacggtgaactgaagggggacaagaacacatgtgccttgtccatcatcctgccgcagaca
gagctggccttctacctgcctctgcacaccatctgcgtggagaggctaaaacacgccatc
cgcaaggggcgcatttggatgcagaagggctacaacatcatctcagtgttgagcttggag
attgtccctatcatggagttgttggcctccatgaagtcccacagcgtgccagaggatata
gatataaaagacacggtgctaaatgatgatgacatcggggacagctgccacgaggacttc
ctccacaaggccatcagctctcatctgcagacttgcggctgttcaatcgtagttggaagc
aacccagagaaagtaaataagattgtgcgaacgctctgtgtcttcctcaccccggccgag
aggaagtgctctcgcctctgcaaggcggattcttcctttaaatatgacacaggcctgttt
gtacagggtctgctcaaggactccacgggcagctttgtcctgcccttccgccaggtgctc
tactcaccgtacccaaccactcacatcgacgtcgacatcaacactgtaaagcagatgcca
ccgtgccacgagcacatgtacaaccagcggcgctacatgcggtcagagctgagcacgctc
tggaagaccgacagcgaggaggacataccgccagaaacagtcattcacactgatgaatcc
ttcacacctgacttgaatatatttcaggacgtaatgcataatgacactttggtgaagtca
tttatcgacgaggtgttcatgctgaagccgggcctgtccctgcggagcacctatctggcc
cagttcctgctgctgctccacaggaaatccctcacactgctcaagtacatcgaggacgaa
acgcaaaaggggaagaagccttttagatccttgcgcaatttaaagacggacctggatctg
acggtggagggagacctgagcatcataatggccctcgctgagaagctgagggcggggctg
cactcgtttgtgtttgggaagccgttctacaccagcatgcaggagcgagatgtactcatg
accttgtga
DBGET
integrated database retrieval system
