KEGG   Pleuronectes platessa (European plaice): 128453579
Entry
128453579         CDS       T09923                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128453579 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pplt03041]
    128453579 (smndc1)
Spliceosome [BR:pplt03041]
 Complex A
  U2 snRNP components
   U2 related factors
    128453579 (smndc1)
 Complex B
    128453579 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    128453579 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR Cic RskA_C
Other DBs
NCBI-GeneID: 128453579
NCBI-ProteinID: XP_053292529
LinkDB
Position
12:complement(18381194..18386146)
AA seq 238 aa
MSDDLAKQLSSYKAQLQQVEVALSTDQENEDLLKLQKDLQEVIDLTQDLLTAQPSDGAST
TNGSDAAPVKHSWKVGNRCMAQWSQDGQVYEAEIEEIDRENGTAAVTFSGYGNAEVIPLQ
NLKPSEEGKRSDEDGNMKPKSRKEQIADQREYKKKKAQKKVLRMKELEQEREEQKSKWQS
FNNKAYNKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTTYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggacgacctggcgaaacagttaagcagctacaaagctcagctgcagcaagtggaa
gtggctctatccaccgatcaggagaatgaggatctgctcaagctccagaaagacttacag
gaagtcatcgatttgacccaagacctcctgaccgcacagcccagtgatggtgcctccacc
accaacggctctgacgctgcccccgtgaagcacagctggaaagtgggaaacaggtgtatg
gctcagtggagtcaggatggacaggtgtatgaggctgagattgaggagatagaccgagag
aacggcactgcagctgtaaccttctctggatacgggaacgctgaagtgatccctctgcag
aacctcaaaccttcagaggaggggaaacgctctgatgaggacgggaacatgaagcccaaa
tcaaggaaagaacaaatagcagatcagagagaatataagaagaagaaagcccagaagaag
gtgctgaggatgaaggagttggagcaggagagggaggagcagaagtcaaagtggcaaagt
ttcaacaacaaagcctacaataagaacaagaagggacaggtaaagaggagcatatttgcg
tctccagagagcgtgaatggaaaggtcggagtgggaacatgtggtattgcagacaagcca
atgaccacgtacaacgacacatcaaaatacaacgtcagacatctaatgccccaatga

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