Pleuronectes platessa (European plaice): 128458427
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Entry
128458427 CDS
T09923
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt00514
Other types of O-glycan biosynthesis
pplt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128458427 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128458427 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pplt01003
]
128458427 (lfng)
Enzymes [BR:
pplt01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
128458427 (lfng)
Glycosyltransferases [BR:
pplt01003
]
Glycan extension
O-Glycan
128458427 (lfng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
Motif
Other DBs
NCBI-GeneID:
128458427
NCBI-ProteinID:
XP_053299226
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All DBs
Position
16:11652979..11660795
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AA seq
355 aa
AA seq
DB search
MLKNNAKKAAITAASAASLGLLLLVLTVQLRRVQVDEVTRVEEPASAQGKTGFSAYFTKL
TRGRREAVRPARSAGSAPPPPAEDITADDVFIAVKTTKKFHRSRLSLLLDTWISRNKQQT
YIFTDGEDEELKKKMGSHAVNTNCSAAHSRQALSCKMAVEYDKFIESGKKWFCHVDDDNY
VNVRTLVKQLSQYPHTQDMYIGKPSLDRPIEATERLGDNKMKPVNFWFATGGAGFCVSRG
LALKMSPWASGGHFMNTAEKIRLPDDCTVGYIIESVLGVPLTRSNLFHSHLENLQLVSRS
EIHKQITLSYGMFENKSNIINLKGAFSVEEDPSRFRSVHCLLYPDTPWCPPQVAY
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaacaatgcgaagaaggcagcgatcaccgcggccagcgcagcatccctgggt
ctgctgctgctcgtgctcaccgtgcagctgcgccgcgtccaggtggacgaggtgacgcgc
gtggaggagcccgcgagcgcgcaggggaagaccggcttctccgcgtacttcaccaaactg
acgcgcggccggcgggaggcggtgaggcccgcgcgctccgccgggtccgcgcctccgcca
cctgccgaggacatcaccgccgacgacgtgttcatcgcggtgaagaccaccaagaagttc
caccgctccagactgagcctgctgctggacacgtggatctccaggaacaagcaacagacg
tacatcttcacagacggagaagacgaggagctaaaaaagaaaatggggagtcatgcagtc
aacaccaactgctccgccgctcacagccgacaagccctgtcttgcaagatggcggtggaa
tatgataagttcatagagtccgggaagaaatggttctgtcatgtcgatgatgacaactac
gtgaatgttcggactcttgtgaagcagctgtcccagtacccccacacccaggacatgtac
attggcaaacccagtctggaccggcccatcgaggctacagagaggcttggcgacaacaag
atgaaaccagtcaacttctggtttgcgactggaggagccggtttctgcgtgagccggggt
ctggcgctgaagatgagcccatgggccagtggcgggcacttcatgaacacagcggagaaa
atccgtctgcccgacgactgcaccgttggctacatcatcgagtcggttctcggggttccg
ctgacccgcagcaacctgttccactcccacctggagaacctgcaactggtgtcgcgatct
gagattcacaaacagatcaccctcagttatgggatgtttgaaaacaagagcaatattatc
aatttgaaaggggcgttttctgtggaggaggatccatcgaggttcaggtctgtgcactgt
ctcctgtacccagacaccccgtggtgtcctcctcaggttgcctattag
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