Pleuronectes platessa (European plaice): 128459897 Help Entry 128459897         CDS       T09923                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism pplt  Pleuronectes platessa (European plaice) Pathway pplt04115   p53 signaling pathway pplt04145   Phagosome pplt04148   Efferocytosis pplt04350   TGF-beta signaling pathway pplt04510   Focal adhesion pplt04512   ECM-receptor interaction pplt04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pplt00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     128459897 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128459897 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     128459897 (thbs1b)    04148 Efferocytosis     128459897 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     128459897 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     128459897 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     128459897 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pplt04131]     128459897 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pplt00536]     128459897 (thbs1b) Membrane trafficking [BR:pplt04131]  Endocytosis   Phagocytosis    Opsonins     128459897 (thbs1b) Glycosaminoglycan binding proteins [BR:pplt00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128459897 (thbs1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  128459897 NCBI-ProteinID:  XP_053300817 LinkDB All DBs Position 17:complement(19555595..19567162) Genome browser AA seq 1169 aa AA seqDB search MKLMGIFLLLMVWSCEAARVAESRDDNSVHDLFELIQVPKKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKQDGSGPVFEIVS NGKANTLDIVFSTENKQQVVSIEDVDLATGHWKNITLLVQEDRAVLYAGCEEVNTAELDA PIQSILTQDTPLTAQLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQNSLTSDTM VLDNLNGSSAIRTEYTGHKTKDLQMVCGFSCDDLVSMFKELKSLGVVVKELSNELRQLTD ENKLIKTRIDIHSGVCIHNGIVHKNRDEWTVDDCTECTCQNSATVCRKISCPLIPCANAT VPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTR DCYLQECDKRFKQDGGWSHWSPWSSCSVTCGSGVITHIRLCNSPNPQFGGKDCAGEGRQT EKCQMSPCPINGNWGPWSLWDTCSLTCGGGVQTRKRLCNDPEPKYDGKECVGEAKVTQIC NKKSCPVDGCLSNPCFAGAKCTSLTDGSWKCGKCPAGYSGNGIKCKDVDECKEVPDACFE FNGVHRCENTEPGYNCLPCPPRYSGPQPFGKSAENAVANKQVCTPRNPCLDGSHDCNKNA RCNYLGHFADPMYRCECRPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPNL PNSGQEDYDKDGIGDACDSDDDNDGIPDDRDNCPFIFNPRQYDYDRDDVGDRCDNCPYNS NPDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHN PDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDND GIPDDKDNCRLAFNPDQLDTDGDGRGDVCKDDFDQDNVPDIYDVCPENFGISETDFRQFQ MVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGLAVGYHEFNAVDFSGTFFINTERDDD YAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNALW HTGNTTGQVRTLWHDPKHVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADTGSIYDK TYAGGRLGLFVFSQEMVYFSDLKYNCRDA NT seq 3510 nt NT seq  +upstreamnt  +downstreamnt atgaagctcatggggatatttttgctgttgatggtttggagctgcgaggctgcgagagtc gcagagagcagagacgacaatagcgtgcacgacttgttcgaactcatccaagtccccaag aagaaccacggggtcaccctggtgaaaggagacgacccgtacagccccgcctacaagatc ctcaacccggacctgatccccccggtccccgagagcgcctttagggacctcatcgactcc atccatgccgagagaggattcctcctgctgctcaacttcaagcagttcaagcggacccgg gggagcctcctcaccgtggagaagcaggacggctccggacccgtgttcgagatcgtgtcc aacggcaaagcgaacaccttggacatagttttctccaccgagaacaagcagcaggtggtg tccatcgaggacgtggacctggccacgggtcactggaagaacatcaccctgttagtgcag gaggaccgggcggtgctgtacgcgggatgcgaggaggtgaacaccgcggagctggatgcg cccatccagagcatcctgactcaggacactccgctcaccgcgcagctccggatcgggaag ggagcggtgaaggacaggttcatgggggtcctacagaatgtgcgctttgtgtttggaaca actctcgaagccatcctccgcaacaaagggtgccagaactcattgacatccgacaccatg gtcctggacaacctgaatggttcctcagccataagaacagagtacactggacataagacc aaagacctgcagatggtctgtggcttctcctgtgacgacttggtcagcatgttcaaggag ctgaagagtctcggtgtggtggtgaaggagctgtccaatgagctccgacagctgacggat gaaaacaagctgattaaaacccgcatcgacatccacagcggagtctgcatccacaacggc atcgtgcacaagaacagagacgagtggaccgtggacgactgcaccgagtgcacttgtcag aactctgctactgtctgccgcaagatctcctgccccctgatcccctgcgccaacgctact gttcctgacggagagtgctgcccccgctgtggaacaccgagtgactatgcagaggacggc tggtcgccgtggtctgaatggacccattgttccgtgtcgtgtgggcggggcatccagcag cgtgggcgctcctgcgaccgtatcaataacaactgtgaaggcacctcggtgcagacccgc gactgctacctccaggagtgtgacaaacgcttcaagcaggacggcggctggagccactgg tcaccctggtcttcctgctccgtcacctgtgggtctggtgtcatcacccacatccgcctc tgcaactcccccaaccctcagtttggaggcaaggactgcgcgggagagggccgacaaacg gagaaatgtcagatgtctccgtgccccatcaatggcaactgggggccgtggtcactgtgg gacacatgcagtcttacctgtggaggtggtgtccagactcgtaaacgcctgtgcaatgac cctgaacccaaatacgatggcaaagagtgtgttggtgaagccaaagtcacacagatatgc aacaagaaatcctgccccgtcgatggatgtctttccaacccctgctttgctggagcaaaa tgcaccagtttgactgatggttcctggaaatgtggcaagtgtccagctggttatagcggc aacggtatcaagtgcaaagatgttgacgagtgcaaagaggtgccagacgcttgctttgag ttcaatggcgtccatcgctgtgagaacacagaaccaggctacaactgcctgccctgtccc cctcgctactcaggaccccagccttttggcaaaagtgcggagaatgctgtggctaacaaa caggtgtgcacaccccgtaatccctgcctcgatggaagccacgactgcaacaaaaacgcc cgctgcaactacctgggacacttcgccgatccaatgtaccgctgcgagtgtaggcccggg tacgccggcaacggccatatctgtggagaggacacggatctcgatggatggcccaacgct gacttggtttgcgtggagaacgccacctaccactgcaaaaaggacaactgccccaacctc cccaactccgggcaggaagattacgataaggacggcattggagatgcttgtgacagtgat gatgacaatgatggcattcctgacgacagggacaactgtccattcatcttcaaccccagg cagtacgattatgaccgtgatgacgtgggtgaccgctgtgataactgcccctacaacagt aatccagaccagacagacacagacaacaatggagagggagatgcctgcgccgtggacatc gatggagatggtatattaaacgagaaggataactgtccctatgtgtacaacgtggaccaa agagacacagacctggacggagtcggagacatgtgcgataactgccctctggaacataat cctgatcaggtggattcagatgacgaccgcgtgggagacaagtgtgacagcaaccaggac attgatgaggacggacatcagaacaatctggacaactgcccgtacatccccaatgccaat caggccgaccatgacaaggacggcaagggagacgcctgtgaccatgatgacgacaatgat ggcatccctgacgacaaagacaactgcagactggccttcaaccctgaccagctggacact gatggtgatggcagaggagatgtttgcaaagatgactttgaccaggacaacgtgccggac atctatgacgtgtgtcccgaaaactttggcattagtgagacagacttccgccagttccag atggttcctctggacccgaaaggcacctcccagattgatcctaactgggtcgtgcgccat cagggcaaagagctcgtccagactgtcaactgtgaccctggccttgctgttgggtaccac gagtttaatgcagtggacttcagtgggaccttcttcatcaacacagagagggatgatgat tatgccggctttgtgtttggctaccagtccagttccaggttctacgttgtaatgtggaag cagattacgcagacctactggtcaaataaacccaccaaggcccaggggtattctggcctt tccattaaagtggtaaattccaccactggtcctggagagcacctcagaaacgccctctgg cacaccgggaataccacgggacaggtccgaactctctggcatgacccaaagcatgtcgga tggaaagacttcactgcctacagatggcatctgatccacagaccaagaacaggacatatt agagttgtgatgtacgagggcaaaaagatcatggctgataccggtagcatctatgacaag acatacgcgggtggcaggctaggtcttttcgtcttctcacaggagatggtatacttttca gacctcaagtataactgcagagatgcataa

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