KEGG   Paenibacillus polymyxa SC2: PPSC2_02955
Entry
PPSC2_02955       CDS       T01335                                 
Symbol
yodJ
Name
(GenBank) peptidase M15
  KO
K07260  zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
Organism
ppm  Paenibacillus polymyxa SC2
Pathway
ppm00550  Peptidoglycan biosynthesis
ppm01100  Metabolic pathways
ppm01502  Vancomycin resistance
ppm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PPSC2_02955 (yodJ)
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PPSC2_02955 (yodJ)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PPSC2_02955 (yodJ)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ppm01002]
    PPSC2_02955 (yodJ)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppm01011]
    PPSC2_02955 (yodJ)
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:ppm01504]
    PPSC2_02955 (yodJ)
Enzymes [BR:ppm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.17  Metallocarboxypeptidases
    3.4.17.14  zinc D-Ala-D-Ala carboxypeptidase
     PPSC2_02955 (yodJ)
Peptidases and inhibitors [BR:ppm01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   PPSC2_02955 (yodJ)
Peptidoglycan biosynthesis and degradation proteins [BR:ppm01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   PPSC2_02955 (yodJ)
Antimicrobial resistance genes [BR:ppm01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    PPSC2_02955 (yodJ)
SSDB
Motif
Pfam: VanY ALMS_repeat
Other DBs
NCBI-ProteinID: ADO54553
UniProt: E3EF33
LinkDB
Position
664242..665147
AA seq 301 aa
MKRHIQQTRTSQRWTKALIPGLILPGLLLAACQQGGSGGQESEPLKSSTTVQENVQPSTQ
TDAGNGSTSAGQASADTGSGQADPVMALRSQSALQATVKEEDGTAVVTNATSDTVVVNKK
RSLPVGYVPDDLVEPQVPFSFEGPHEKRHLRKEAAEALEKLFDGAKKDGIELRAVSGYRS
YKRQVSIFDNNVKTKGQEYASKVSAVPGTSEHQTGLSIDVSSPSVGNVLEQSFGASKEGQ
WLEQHAPEYGFIIRYMQGKEDVTGYVYEPWHIRYVGVDIAEDVAKQGLTLEEYFDENNIK
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaacgacatatacaacagacgcgcacatctcagcgatggaccaaagcgctcattccg
gggctgatcttgccagggctattgctggcagcttgccagcaaggaggatcaggtggacag
gaaagtgagccattaaaatcatccacaacggtacaggagaatgtacagccttccacccag
acggatgcggggaatggcagtactagcgctggacaagcctctgcggatacaggaagtgga
caggctgatcctgtgatggcgttgcgaagccaaagtgcactgcaggccacagttaaggaa
gaggatggaactgcggttgtcaccaatgcgacttcggatacagtcgtggtgaacaaaaag
cgcagcttgcctgtgggctacgtcccggatgatctggtagagccgcaggtgcctttttcc
tttgagggaccgcatgagaagcggcatttgcgtaaggaagcggcagaggcactggagaag
ctgttcgacggtgcgaaaaaggacggcattgagctgcgtgcggtatcgggataccgttcc
tataagcgtcaggtgtctattttcgacaacaatgtaaagacaaaggggcaggaatatgcc
tctaaagtcagcgctgtaccaggtacgagtgagcatcagacgggattgtccattgacgta
tccagccccagcgtaggcaatgtgctggagcaatcgttcggagcttccaaggaaggtcaa
tggctggaacaacatgcaccggaatacggatttattattcgttatatgcagggtaaggaa
gatgtgaccggctatgtgtacgagccttggcatatccgttatgtgggagtagacattgca
gaggatgtagccaagcaagggttgacgctggaggaatatttcgacgaaaacaatatcaag
ctatag

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