KEGG   Paludibacter propionicigenes: Palpr_0103
Entry
Palpr_0103        CDS       T01362                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ppn  Paludibacter propionicigenes
Pathway
ppn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Palpr_0103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppn03400]
    Palpr_0103
Enzymes [BR:ppn01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Palpr_0103
DNA repair and recombination proteins [BR:ppn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Palpr_0103
 Prokaryotic type
     Palpr_0103
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 RecR_HhH HHH_2 HHH_8 EndIII_4Fe-2S HHH_3 Ribosomal_S13
Other DBs
NCBI-ProteinID: ADQ78265
UniProt: E4T075
LinkDB
Position
complement(119428..120090)
AA seq 220 aa
MKQNWQEHLELLMQQYANRKHPLDYKSRYQLLVLVILSAQDSDKHINELASAFFEAYPSI
NSLAKASAEELHQHISTVRNFGNKAGWLVKLAQQVGDDDNIPTTMSELTKLPGIGRKSAN
VIIRESGNEAEGVIVDLHVVRVAPRIGIATGTQPEKIEKQLMSIVPRERWNDIGMAISFM
GREVCRPSHPKCDSCVMSAVCNFHNGITEEAGKTNEPSLF
NT seq 663 nt   +upstreamnt  +downstreamnt
atgaaacaaaactggcaagaacatctggaactattgatgcaacaatacgctaaccgcaag
catccactcgattataaaagccgttatcaattattagtgttggtgatactctcggcacag
gattcggacaagcacatcaacgaactggcttcggcttttttcgaagcttatccatctata
aacagtttggcaaaagcaagtgcggaagaattgcatcaacacatcagcacggttcgcaac
tttgggaataaagcaggctggctggtgaaactggcgcagcaggtaggcgatgacgataac
atacctaccacgatgtctgagcttactaagctgcccggtatcgggcgaaaatcggccaat
gtgattattcgcgaatcgggcaacgaagccgaaggggttatagtggacctgcacgtggta
cgtgttgctccacgaataggaatagctaccggcacacagccggagaagatagaaaaacag
cttatgtccatcgtaccgcgcgagcgttggaacgatattggaatggctatttcgtttatg
ggtcgcgaagtgtgccgtccctcccaccctaagtgcgacagttgcgtgatgagcgcagtc
tgcaattttcacaacggaattaccgaagaggccggaaaaaccaatgagccttcattgttt
tag

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