Paludibacter propionicigenes: Palpr_0543
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Entry
Palpr_0543 CDS
T01362
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn00790
Folate biosynthesis
ppn01100
Metabolic pathways
Module
ppn_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Palpr_0543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppn03016
]
Palpr_0543
Enzymes [BR:
ppn01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Palpr_0543
Transfer RNA biogenesis [BR:
ppn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Palpr_0543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ADQ78702
UniProt:
E4T1V8
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All DBs
Position
660889..661518
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AA seq
209 aa
AA seq
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MRSKADEILLNVVEIFHSIQGEGANAGRSAVFVRLSNCNKNCWYCDTDWSKGETMSVSQI
LAEVNKFVGKKDYPNNLIIWTGGEPTLQLTDEILSHFSEYYNCIETNGTNPVPSLIKYIS
CSPKVKPEVLRKNFKHVNEFRYPIGDGDVLPDIAELPAADNYIVSPIFLGEAKKRFEQVD
ENVKYAIDFVKKNPRWRLSLQLHKLLNIP
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtaaagctgatgagatattactcaatgttgttgaaatttttcattcaattcag
ggcgaaggcgccaacgcgggtcgttcggctgtatttgtaagattatcgaattgtaataaa
aattgctggtattgcgatactgattggagtaaaggtgagactatgtctgtttctcaaata
cttgcagaagtaaataaattcgttggtaaaaaagattatccgaataatttaattatctgg
actggtggagagcctactttacaactaaccgatgaaattctatcgcatttttccgagtat
tataattgcatagaaacaaatggtactaatcctgtcccatcgctgataaaatacataagc
tgtagtcctaaagtaaaaccggaagtgttacgaaaaaacttcaaacatgtaaatgagttt
cgatatccgattggtgacggtgatgtacttcccgatatcgcagaattaccagcggctgat
aattatattgttagccctatctttttaggcgaagcaaaaaaacgatttgaacaagtagat
gaaaatgtgaagtatgctattgattttgtaaagaaaaatcctagatggaggttgtcacta
cagcttcataaactattaaatatcccttaa
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