Pandoraea pnomenusa DSM 16536: LV28_04085
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Entry
LV28_04085 CDS
T03411
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase subunit E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00020
Citrate cycle (TCA cycle)
ppnm00785
Lipoic acid metabolism
ppnm01100
Metabolic pathways
ppnm01110
Biosynthesis of secondary metabolites
ppnm01120
Microbial metabolism in diverse environments
ppnm01200
Carbon metabolism
ppnm01210
2-Oxocarboxylic acid metabolism
Module
ppnm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppnm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LV28_04085 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LV28_04085 (sucA)
Enzymes [BR:
ppnm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LV28_04085 (sucA)
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Paralog
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AIU25825
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All DBs
Position
2252652..2255507
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AA seq
951 aa
AA seq
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MMEQFQANSYLFGGNAPYVEELYESYLDNPASVPDNWRQYFDALQNVPAVDGSNANDVAH
APIVESFAQRAKANAFVSHAGASDLAVARKQVHVQSLVAAYRFLGARWANLDPLKRQERP
AIPELEPAFYDLTEADMDSVYSAENTYFGFEQASLRDLLKALRDTYCGSIGAEYMYISDP
VQKRWWQERLEKVRATPNFSADKKKHILERLTAAEGLERYLHTKFVGQKRFSLEGGESFI
VAMDELVHHAGAKGVQEIVIGMAHRGRLNVLVNTLGKMPSDLFAEFEGKHVDDLPAGDVK
YHKGFSSDVSTGGGPVHLSLAFNPSHLEIVNPVVEGSAKARMDRRGEADAASVLPVQVHG
DAAFAGQGVVMETLNLAQTRGYGTHGTVHIVINNQIGFTTSDPRDARSTTYCSDVVKMIE
APVLHVNGDDPEAVVLAMQLALEFRQEFKKDAVVDIVCFRKLGHNEQDTPAVTQPLMYKK
IAQHPGTRALYAEKLVTQGVISADEGDGFVKAYRKAMDDGHHTIDPVLSNYKSKYAVDWV
PFLNKKWTDAGDTAVPLNELKRLAERITTIPANFKVHPLVEKVIKDREKMGKGEQPLDWG
MGEHLAFASLVSSGFAVRLTGQDSGRGTFTHRHAVLHDQNRERWNDGTYVPLQHVADGQA
NFTVIDSVLSEEAVLGFEYGYSTAEPNTMVLWEGQFGDFANGAQVVIDQFISSGEVKWGR
VSGLTMLLPHGYEGQGPEHSSARIERYLQLCADTNMQVVQPTTPAQIFHLLRRQMIRQLR
KPLIVFTPKSLLRHKEAVSDLSELAKGGFQTVIGETDASIDAKKVKRVVACSGRLYYDLI
ARRREEKSSDVAIVRVEQLYPFPHKAFENELKKYENLAEVVWAQDEPQNQGPWFYIEHHL
IDAMSAGQKLAYAGRAASASPAVGYYAKHYEQLKSLLDTAFGRLKGATVKQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
ttgatggaacaattccaagcgaactcgtatctcttcggcggcaatgccccctatgtcgaa
gaactgtacgagtcgtatcttgataatccggcgtccgtgccggacaactggcgccagtat
ttcgacgcgctgcaaaacgttcccgctgttgatggttccaacgccaacgacgtggctcac
gccccgatcgtggagtcgttcgcccagcgcgccaaggccaatgccttcgtgtcgcacgcc
ggcgcatccgacctggccgtggcccgcaagcaggttcacgtgcagtcgctcgtggcagcc
taccgattcctcggcgctcgctgggccaatctggacccgctcaagcgtcaggagcgcccg
gccattccggaactggaacccgcgttctacgacctgaccgaagccgacatggacagcgtg
tactcggccgagaacacgtacttcggtttcgaacaggccagcctgcgcgatctgctcaag
gcgctgcgcgacacgtactgcggctcgatcggcgccgagtacatgtacatcagcgatccg
gtgcaaaagcgctggtggcaggagcgtctggagaaggtgcgtgcaacgcccaacttcagc
gccgacaagaagaagcacatcctcgaacgtctcacggccgctgaaggcctcgagcgttat
ctgcacaccaagttcgtcggccagaagcgcttctcgctcgaaggcggcgaatcgttcatc
gtggcgatggacgagctcgtccaccacgccggtgcgaagggcgtgcaggaaatcgtgatc
ggcatggcccaccgcggccgtctgaacgtgctggtcaacaccctcggcaagatgccgtcg
gacctgttcgccgaattcgagggcaagcacgtcgacgacctgccggccggtgacgtgaag
taccacaagggtttctcgagcgacgtctcgacgggcggtggtccggtccacctgtcgctg
gcgttcaacccgtcgcacctggaaatcgtgaacccggtggtcgaaggctcggccaaggcc
cgtatggaccgtcgcggcgaagccgacgcggccagcgtgctgccggtgcaagtgcacggc
gacgcggcattcgccggtcagggcgtcgtgatggaaacgctgaacctcgcgcaaacgcgc
ggctacggcacgcacggcacggtgcacatcgtcatcaacaaccagatcggcttcaccacg
tcggatccgcgtgacgctcgttcgacgacgtactgctcggatgtggtcaagatgatcgaa
gcgccggtgctgcacgtgaacggcgacgatcccgaagcggtcgtgctggccatgcaactg
gccctcgaattccgtcaggaattcaagaaggatgccgtggtggacatcgtttgcttccgc
aagctgggtcacaacgagcaggacaccccggcggtcacgcagccgctgatgtacaagaag
atcgcccagcacccgggcacgcgcgcgctgtacgccgagaagctggtcacgcaaggcgtg
atctcggccgacgagggcgacggcttcgtcaaggcctaccgcaaggccatggacgacggc
catcacaccatcgacccggtgctctcgaactacaagagcaagtacgccgtcgactgggtg
ccgttcctgaacaagaagtggaccgacgccggcgacaccgccgtgccgctcaacgagctc
aagcgtcttgccgagcgcatcaccacgattcccgcgaacttcaaggttcacccgctcgtc
gagaaggtcatcaaggaccgcgagaagatgggcaagggcgagcagccgctcgactggggc
atgggcgagcatctggcgttcgcatcgctggtctcgtcgggcttcgccgtgcgcctgacc
ggtcaggattcgggccgcggtacgttcacgcaccgccatgccgtgctccacgaccagaac
cgcgagcgttggaacgacggtacgtacgtgccgctgcaacacgtggccgacggtcaggcc
aacttcacggtgatcgactcggtgctgtccgaagaggccgtgctgggcttcgaatacggt
tactccaccgccgagccgaacacgatggtgctgtgggaaggccagttcggtgacttcgcc
aacggcgctcaggtcgtgatcgaccagttcatctcgagcggcgaagtgaagtggggccgc
gtgtcgggcctgacgatgttgctgccgcacggctatgaaggccagggtccggagcactcg
tccgcacgtatcgagcgttacctgcaactgtgcgccgacacgaacatgcaagtggtccag
ccgaccacgccggcacagatcttccacctgctgcgtcgtcagatgatccgccagctgcgc
aagccgctgatcgtgttcacgccgaagtcgctgctgcgtcacaaggaagccgtgagcgac
ctgtcggaactcgccaagggtggcttccagacggtcatcggcgagaccgatgcctcgatc
gacgccaagaaggtcaagcgtgtcgttgcctgctcgggtcgcctctactacgacctgatc
gcccgtcgtcgcgaagaaaagtcgagcgatgtcgcgatcgtgcgcgtggaacagctgtat
ccgttcccgcacaaggcgttcgagaacgaactgaagaagtacgaaaacctcgccgaagtg
gtgtgggcccaggacgagccgcaaaaccagggtccgtggttctacatcgaacaccacctg
attgatgcgatgagcgcgggtcagaagctggcttacgcgggtcgcgcggcttcggcctcg
cctgccgtgggttactacgccaagcactacgaacagctcaagtcgctgctcgacaccgcg
ttcggtcgcctcaagggcgcgaccgtgaagcagtaa
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