Pandoraea pnomenusa DSM 16536: LV28_07525
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Entry
LV28_07525 CDS
T03411
Name
(GenBank) hemolysin D
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm01501
beta-Lactam resistance
ppnm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LV28_07525
01503 Cationic antimicrobial peptide (CAMP) resistance
LV28_07525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppnm03036
]
LV28_07525
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_07525
01504 Antimicrobial resistance genes [BR:
ppnm01504
]
LV28_07525
Chromosome and associated proteins [BR:
ppnm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LV28_07525
Transporters [BR:
ppnm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LV28_07525
Antimicrobial resistance genes [BR:
ppnm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LV28_07525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
DUF1344
FlgT_C
RibLong
CoV_NSP8
Motif
Other DBs
NCBI-ProteinID:
AIU26410
UniProt:
A0A378YIL9
LinkDB
All DBs
Position
1496280..1497515
Genome browser
AA seq
411 aa
AA seq
DB search
MHVKRSSLGMVTAVAIAVMTLAACGKKPQQPQAMVPEVGVVTLQPQNVTLTTDLPGRTSP
YRVADVRARVDGIVLKRDFTEGGDVKAGQRLYKIDPATYQAAYENAKATLAKAVANQAST
KLLADRYKQLVAAEAVSKQDYDNAVAAALQADADVQAGKAAVDTARINLGYTDVPAPISG
RTGLSQVTEGAYVQAGAATLMTTVQQIDPMYVDVTQSAADGLRLRRALADGKLQSAGKNA
AAVSLTLEDGTKYPLEGKLQFSDITVDQTTGSVTVRAIFPNPNRELLPGMFVHATLREGV
KEGGLLVPQQGVTRDQKGQPTALIVNKEGKVELRQLVTDRAIGDKWLVSSGLAAGDQVIV
AGLQKVRPGAPAKAVPAQLPGAQAPAGASAPAAAAAAPASQADAASSAKAQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcaagagaagttcactggggatggtcactgccgtagcaatcgcggtcatgacc
ctggccgcatgcggcaagaagccgcagcagccgcaggccatggtgccggaagtcggcgtc
gtgacgctgcaaccccagaacgtaacactgacgaccgatctgcccggacgtacctcgccc
tatcgcgtcgcggacgttcgcgcgcgcgtcgacggcatcgtgctcaagcgcgatttcacc
gaaggcggtgacgtcaaggcggggcagcgtctgtacaagatcgatccggccacttaccag
gccgcctatgagaacgccaaggccacgctcgcgaaggcggtcgcgaatcaggcgtcgacg
aagctgctggccgatcgctacaagcaactggtggccgccgaggccgtgtcgaagcaggat
tacgacaacgccgtggcggcagcccttcaggccgacgccgacgtgcaggccggcaaggcc
gccgtggacaccgccaggatcaacctgggctacaccgatgtgcccgccccgatctcgggc
cgtaccggcctgtcgcaggtgaccgagggtgcctacgtgcaggccggcgccgccacgctc
atgacgaccgttcagcagatcgatccgatgtacgtcgacgtgacgcaatcggcggccgac
gggctgcgtctgcgccgcgcgctggccgacggcaagctgcagagcgccggcaagaatgcg
gctgccgtgtcgctcacgctggaagacggcacgaagtacccgctcgagggcaagctgcag
ttctcggacatcaccgtcgaccagacgaccggctcggtgaccgtgcgcgccattttcccg
aacccgaaccgcgagttgctgcccggcatgttcgtgcacgccacgctcagggaaggggtc
aaggaaggcggtctgctggtgccgcagcaaggtgtcacgcgtgaccagaagggccagccg
acggcgctcatcgtgaacaaggaaggcaaggtcgagttgcgccagctggtgaccgatcgg
gccatcggcgataaatggctcgtgagctcgggtctggcggccggcgatcaggtgatcgtg
gctggcctgcagaaggttcgtccgggcgcccccgcgaaggccgttccggcacagttgccg
ggtgcacaagcccctgcgggcgccagcgcgccggccgcggccgccgctgcccccgcatcg
caggccgacgccgcctcgagcgccaaagcccaataa
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