Pandoraea pnomenusa RB38: DA70_02260
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Entry
DA70_02260 CDS
T03067
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase subunit E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno00020
Citrate cycle (TCA cycle)
ppno00785
Lipoic acid metabolism
ppno01100
Metabolic pathways
ppno01110
Biosynthesis of secondary metabolites
ppno01120
Microbial metabolism in diverse environments
ppno01200
Carbon metabolism
ppno01210
2-Oxocarboxylic acid metabolism
Module
ppno_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppno_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DA70_02260 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DA70_02260 (sucA)
Enzymes [BR:
ppno01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
DA70_02260 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AHN73409
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All DBs
Position
complement(3102901..3105756)
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AA seq
951 aa
AA seq
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MMEQFQANSYLFGGNAPYVEELYESYLDNPASVPDNWRQYFDALQNVPAVDGSNANDVAH
APIVESFAQRAKANAFVSHAGASDLAVARKQVHVQSLVAAYRFLGARWANLDPLKRQERP
AIPELEPAFYDLTEADMDSVYSAENTYFGFEQASLRDLLKALRDTYCGSIGAEYMYISDP
VQKRWWQERLEKVRATPNFSADKKKHILERLTAAEGLERYLHTKFVGQKRFSLEGGESFI
VAMDELVHHAGAKGVQEIVIGMAHRGRLNVLVNTLGKMPSDLFAEFEGKHVDDLPAGDVK
YHKGFSSDVSTGGGPVHLSLAFNPSHLEIVNPVVEGSAKARMDRRGEADAASVLPVQVHG
DAAFAGQGVVMETLNLAQTRGYGTHGTVHIVINNQIGFTTSDPRDARSTTYCSDVVKMIE
APVLHVNGDDPEAVVLAMQLALEFRQEFKKDAVVDIVCFRKLGHNEQDTPAVTQPLMYKK
IAQHPGTRALYAEKLVTQGVISADEGDGFVKAYRKAMDDGHHTIDPVLSNYKSKYAVDWV
PFLNKKWTDAGDTAVPLNELKRLAERITTIPANFKVHPLVEKVIKDREKMGKGEQPLDWG
MGEHLAFASLVSSGFAVRLTGQDSGRGTFTHRHAVLHDQNRERWNDGTYVPLQHVADGQA
NFTVIDSVLSEEAVLGFEYGYSTAEPNTMVLWEGQFGDFANGAQVVIDQFISSGEVKWGR
VSGLTMLLPHGYEGQGPEHSSARIERYLQLCADTNMQVVQPTTPAQIFHLLRRQMIRQLR
KPLIVFTPKSLLRHKEAVSDLSELAKGGFQTVIGETDASIDAKKVKRVVACSGRLYYDLI
ARRREEKSSDVAIVRVEQLYPFPHKAFENELKKYENLAEVVWAQDEPQNQGPWFYIEHHL
IDAMSAGQKLAYAGRAASASPAVGYYAKHYEQLKSLLDTAFGRLKGATVKQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
ttgatggaacaattccaagcgaactcgtatctcttcggcggcaatgccccctatgtcgaa
gaactgtacgagtcgtatcttgataatccggcgtccgtgccggacaactggcgccagtat
ttcgacgcgctgcaaaacgttcccgctgttgatggttccaacgccaacgacgtggctcac
gccccgatcgtggagtcgttcgcccagcgcgccaaggccaatgccttcgtgtcgcacgcc
ggcgcatccgacctggccgtggcccgcaagcaggttcacgtgcagtcgctcgtggcagcc
taccgattcctcggcgctcgctgggccaatctggacccgctcaagcgtcaggagcgcccg
gccattccggaactggaacccgcgttctacgacctgaccgaagccgacatggacagcgtg
tactcggccgagaacacgtacttcggtttcgaacaggccagcctgcgcgatctgctcaag
gcgctgcgcgacacgtactgcggctcgatcggcgccgagtacatgtacatcagcgatccg
gtgcaaaagcgctggtggcaggagcgtctggagaaggtgcgtgcaacgcccaacttcagc
gccgacaagaagaagcacatcctcgaacgtctcacggccgctgaaggcctcgagcgttat
ctgcacaccaagttcgtcggccagaagcgcttctcgctcgaaggcggcgaatcgttcatc
gtggcgatggacgagctcgtccaccacgccggtgcgaagggcgtgcaggaaatcgtgatc
ggcatggcccaccgcggccgtctgaacgtgctggtcaacaccctcggcaagatgccgtcg
gacctgttcgccgaattcgagggcaagcacgtcgacgacctgccggccggtgacgtgaag
taccacaagggtttctctagcgacgtctcgacgggcggtggtccggtccacctgtcgctg
gcgttcaacccgtcgcacctggaaatcgtgaacccggtggtcgaaggctcggccaaggcc
cgtatggaccgtcgcggcgaagccgacgcggccagcgtgctgccggtgcaagtgcacggc
gacgcggcattcgccggtcagggcgtcgtgatggaaacgctgaacctcgcgcaaacgcgc
ggctacggcacgcacggcacggtgcacatcgtcatcaacaaccagatcggcttcaccacg
tcggatccgcgtgacgctcgttcgacgacgtactgctcggatgtggtcaagatgatcgaa
gcgccggtgctgcacgtgaacggcgacgatcccgaagcggtcgtgctggccatgcaactg
gccctcgaattccgtcaggaattcaagaaggatgccgtggtggacatcgtttgcttccgc
aagctgggtcacaacgagcaggacaccccggcggtcacgcagccgctgatgtacaagaag
atcgcccagcacccgggcacgcgcgcgctgtacgccgagaagctggtcacgcaaggcgtg
atctcggccgacgagggcgacggcttcgtcaaggcctaccgcaaggccatggacgacggc
catcacaccatcgacccggtgctctcgaactacaagagcaagtacgccgtcgactgggtg
ccgttcctgaacaagaagtggaccgacgccggcgacaccgccgtgccgctcaacgagctc
aagcgtcttgccgagcgcatcaccacgattcccgcgaacttcaaggttcacccgctcgtc
gagaaggtcatcaaggaccgcgagaagatgggcaagggcgagcagccgctcgactggggc
atgggcgagcatctggcgttcgcatcgctggtctcgtcgggcttcgccgtgcgcctgacc
ggtcaggattcgggccgcggtacgttcacgcaccgccatgccgtgctccacgaccagaac
cgcgagcgttggaacgacggtacgtacgtgccgctgcaacacgtggccgacggtcaggcc
aacttcacggtgatcgactcggtgctgtccgaagaggccgtgctgggcttcgaatacggt
tactccaccgccgagccgaacacgatggtgctgtgggaaggccagttcggtgacttcgcc
aacggcgctcaggtcgtgatcgaccagttcatctcgagcggcgaagtgaagtggggccgc
gtgtcgggcctgacgatgttgctgccgcacggctatgaaggccagggtccggagcactcg
tccgcacgtatcgagcgttacctgcaactgtgcgccgacacgaacatgcaagtggtccag
ccgaccacgccggcacagatcttccacctgctgcgtcgtcagatgatccgccagctgcgc
aagccgctgatcgtgttcacgccgaagtcgctgctgcgtcacaaggaagccgtgagcgac
ctgtcggaactcgccaagggtggcttccagacggtcatcggcgagaccgatgcctcgatc
gacgccaagaaggtcaagcgtgtcgttgcctgctcgggtcgcctctactacgacctgatc
gcccgtcgtcgcgaagagaagtcgagcgatgtcgcgatcgtgcgcgtggaacagctgtat
ccgttcccgcacaaggcgttcgagaacgaactgaagaagtacgaaaacctcgccgaagtg
gtgtgggcccaggacgagccgcaaaaccagggtccgtggttctacatcgaacaccacctg
attgatgcgatgagcgcgggtcagaagctggcttacgcgggtcgcgcggcttcggcctcg
cctgccgtgggttactacgccaagcactacgaacagctcaagtcgctgctcgacaccgcg
ttcggtcgcctcaagggcgcgaccgtgaagcaataa
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