Pandoraea pnomenusa RB38: DA70_04585
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Entry
DA70_04585 CDS
T03067
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
ppno
Pandoraea pnomenusa RB38
Pathway
ppno01501
beta-Lactam resistance
ppno01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppno00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DA70_04585
01503 Cationic antimicrobial peptide (CAMP) resistance
DA70_04585
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppno02000
]
DA70_04585
01504 Antimicrobial resistance genes [BR:
ppno01504
]
DA70_04585
Transporters [BR:
ppno02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DA70_04585
Antimicrobial resistance genes [BR:
ppno01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DA70_04585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
AHN73818
LinkDB
All DBs
Position
complement(2565427..2568669)
Genome browser
AA seq
1080 aa
AA seq
DB search
MWIVNVALKRPYTFIVMAILILLATPLALMRTPVDVLPEINIPVISVIWTYNGLSAQDIA
DRMISGNERGLTTTVNNIEHIESQSLPGIGIIKIFLQPTANFQTALAQVVAVEQAQVKQM
PPGATPPLIISYSASSIPVMQLGLSSPSLSEPALNDTALNFLRPQLVTIPGAAVPYPYGG
KTRLISVDIDSRALLAKGLTAQDVVAAVNAQNLILPTGTAKIGPREYSVDMNGSPPTVEG
LNNIPVRTVNGATTYLREVAHVRTGFSPQTNIVRQNGQRGVLISVMKTGDASTLSVVDSL
KALLPEARAALPEDLHISALFDQSVFVKAAVQGVIHEALIAAALTAAMILLFLGNWRSTC
IIAISIPLSILSSLLALHALGQTINIMTLGGLALAVGILVDDATVTIENIERHLHMGTPL
HEAILEGAGEIAVPALVSTLCICIVFVPMFFLTGVARYLFVPLAEAVVFAMLASYILSRT
LVPTLAMLLMGHAHQADPNARPGAFRRLHQRFDAAFERMRGAYISVLSTLLVRRRVFATS
FLAFCVLSMGLVFVLGSDFFPSVDAGNIRMHMRAPTGTRIEETARLADEVEKVVREIVPA
NELETILDNLGLPYSGINLSYSNAGTIGTLDGEIQIALRPGHQPSATYIDKLRAILPQRF
PGVEFFFQPADVVTQILNFGLPAAIDIQISGNQQLANFGVATKLLKQVRLVPGTVDTHIQ
QRINAPALHLDMDRTRLQQLNLNANAVAQNVLISLSGSSQTSPGFWFNHQNGVEYSLSVQ
SPQYRISSIDDLLRLPVAGTGNNGQPQLLANFVQVRPQERFAVVSHYNIRPVIDIFVSVE
GRDLGSVARDIDKLVVQARKDLPRGSQIVVRGQVSTMQSSYFGLGVGVAMAIVLVYLLIV
VNFQSWVDPLIIVSALPAALAGIVWMLFLTGTRLSVPALTGAIMTMGVATANSILVVAFA
RQRMEAGMAPLKAALEAGASRIRPVLMTALAMIIGMVPMALGLGEGAEQNAPLGRAVIGG
LLFATISTLCFVPLVFAGVHTRLVRRRARRAVQGQRTETGGSGRPARDAGDGDDGDDGAT
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgtggattgtcaacgttgcgctcaaacggccatacacgttcatcgtgatggccattctg
attctgctcgccaccccactcgcgctcatgcgcaccccggtcgacgtgctgccggagatc
aatatcccggtgatcagtgtcatctggacctataacggcctgtccgcgcaggacatcgcc
gatcggatgatctccggcaacgaacgcggactcacgaccaccgtcaacaacatcgagcac
atcgaatcgcagtcgctgcccggcatcgggatcatcaagatctttctgcaaccgacggcc
aatttccagactgccctcgctcaggtcgtggccgtcgagcaggcgcaggtcaagcaaatg
ccccccggcgcgacaccgccgctcatcatcagttactcggcgtcgtccatcccggtgatg
cagcttggcctgtcgagccccagcctgtcggagcccgcgctcaacgacacggccctgaac
ttcctgcgcccccaactggtgacgattcccggcgccgcggtgccgtacccctacggcggc
aagacccgcctgatctcggtcgacatcgactcgcgggccctgctcgccaagggtctgacg
gcgcaggacgtggtggccgccgtcaatgcgcagaacctgatcctgcccaccggcacggcc
aagatcggcccgcgcgagtactccgtcgacatgaacggctctccgccaaccgttgaaggg
ctgaacaacatcccggtgcgcacggtcaacggcgcgacgacctacctgcgcgaagttgcc
cacgtccgcaccggtttctcgccgcagaccaacatcgttcgccagaacggccagcgcggc
gtgctgatctccgtgatgaagacgggcgacgcctcgacgctctcggtggtcgactcgctc
aaggccctgttgcccgaagcacgcgcggccttgccggaagatctgcacatctccgcattg
ttcgatcagtcggtcttcgtgaaggccgccgtgcagggcgtgatccacgaagcgctgatt
gccgccgcgctcaccgcggccatgatcctgctgtttctcggcaactggcgcagcacgtgc
atcatcgcgatctcgattccgctgtcgatcctctcctctttgctggcgctgcatgccctc
gggcagaccatcaacatcatgacgctgggcgggctggcgctggccgtcgggattctcgtg
gatgacgcgaccgtcaccatcgagaatatcgagcgccacctgcacatgggcacgccgttg
cacgaggccattctcgaaggggccggtgaaatcgccgtgccggcgctcgtctcgacactc
tgtatctgcatcgtgttcgtgccgatgttcttcctcacgggtgtggcgcgatacctgttc
gtgccgcttgccgaggcggtggtgttcgccatgctcgcgtcgtacatcctgtcgcgcacg
ctggtgcccacactggccatgctgctcatggggcacgcgcatcaggccgatccgaatgcc
cggcccggcgccttccgacgcctgcatcagcgcttcgacgccgccttcgagcgcatgcgc
ggggcctacatctcggtgctctcgaccctgctcgtgcgccgccgggtgttcgccacgagc
ttcctggcattctgcgtgctctcgatggggctggtgttcgtgctcggctcggacttcttc
ccgtcggtcgatgccggcaacatccgcatgcacatgcgcgcaccgacgggtacccgcatc
gaggaaacggcgcggctggccgacgaggtcgagaaagtcgttcgggaaatcgttccagcc
aacgagctggagacgattctggacaacctcggcctgccgtacagcgggatcaacctgtcg
tacagcaacgccggcaccatcggcacgctcgacggcgagatccagatcgcgctcaggccc
ggccaccagcccagcgcgacctacatcgacaagttgcgcgcgatcctgccgcaacgcttc
cccggcgtggagttcttctttcaacccgccgacgtcgtcacgcagattctcaacttcggc
ctgcccgcggccatcgacatccagatcagcggcaaccagcaactggcgaacttcggggtt
gcaacgaagttgctcaagcaggtccgtctggtacccggcacggtcgacacgcacatccag
caacggatcaacgcgccggcgctgcacctggacatggaccgcacccgcttgcagcaactt
aacctgaatgccaatgccgtggcccagaacgtgctgatctcgctctcgggcagctcgcag
acgtcgccgggcttctggttcaaccaccagaacggcgtggagtacagcctttcggtgcaa
tcgccacagtaccgcatcagttccatcgacgacctgctgcgcctgccggtcgcgggcacg
ggcaacaacggccagccccagttgctcgccaacttcgttcaagtccggccgcaagagcga
tttgccgtggttagccactacaacatccggccggtcatcgacattttcgtgagcgtggaa
ggccgcgatctcgggagcgtggcgcgcgacatcgacaagctggtggtccaggcgcgcaag
gatctgccgcgcggcagccagatcgtggtgcgcggtcaggtcagcaccatgcaaagttcg
tatttcgggctgggcgtgggcgtggcgatggccatcgtgctcgtgtatctgctgatcgtg
gtgaatttccagtcgtgggtcgatccgctcatcatcgtgagcgccctgcccgccgccctc
gccggcatcgtctggatgctctttctcacgggcacgcgactctccgtgcccgcgctcacg
ggggccatcatgacgatgggcgtagccacggccaacagcattctcgtggtcgccttcgcg
cggcaacggatggaggccggcatggcgccgctcaaagccgcgctggaggctggcgcgagc
cggatccgaccggtgctgatgacggcgctggccatgatcatcggcatggtgccgatggcg
cttgggctgggcgaaggcgccgaacagaatgccccgctgggccgggccgtgatcggcggc
ctgctgttcgccacgatctccacactgtgcttcgtgccgctggtctttgcgggcgtgcac
acccgactcgttcggcgcagggcgcggcgagcggtacaaggccagcgcaccgagaccggc
ggttcgggcaggcccgcgagagacgccggcgatggcgacgatggcgacgatggcgccacc
tga
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