Paenibacillus polymyxa M1: PPM_0186
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Entry
PPM_0186 CDS
T01968
Symbol
queE1
Name
(GenBank) ribosomal RNA large subunit methyltransferase N
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo00790
Folate biosynthesis
ppo01100
Metabolic pathways
Module
ppo_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
PPM_0186 (queE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppo03016
]
PPM_0186 (queE1)
Enzymes [BR:
ppo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
PPM_0186 (queE1)
Transfer RNA biogenesis [BR:
ppo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PPM_0186 (queE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_12
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
CCC83123
LinkDB
All DBs
Position
complement(236694..237431)
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AA seq
245 aa
AA seq
DB search
MYKVEFVIMSKLPVIELFGPTIQGEGSVIGLKTMFVRLYGCDYKCSWCDSAFTWDGSSKS
SIQRLTSLEIIDKLNSIGLDGCTYVTISGGNPALYNEPLYDLISELHKRSKKIIVETQGS
IWKDWFNDVDILTISPKPPSSLMTTDWKVLRFIFANLQHSKVSLKVVIFDETDYLFAKKI
QVLFPDIPLYLQVGNAEVTRSECIAGQLLNKLEWLFNLVINDPELQTARVLPQLHTLIWN
NERGK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaagtggagtttgtgattatgagtaaacttccagtaattgagctttttggaccg
actattcaaggagagggttctgttattggactgaagacaatgttcgttcgtttatatgga
tgtgattacaaatgctcttggtgtgattcagcgtttacatgggatggctcgagcaaatca
agtatacaacgtttaaccagtttagaaatcattgataaactgaattcaattggtttagat
ggctgtacatatgtcacaatatcaggtggtaatcctgccctctataacgaacctctgtat
gaccttatttctgaacttcacaaaagatcaaaaaaaattattgtggagactcaagggagt
atatggaaggattggtttaatgatgttgacatattaaccattagccctaaacctcctagt
tctttgatgactacagattggaaagttctccgatttatctttgcgaacctccaacattcg
aaagtatctttaaaagtagttatcttcgatgaaactgattatctttttgcaaaaaaaatc
caagttttatttcctgacattcctttatatcttcaagtagggaatgctgaggttacacgc
agtgagtgtattgctggacagttattaaacaaattagaatggttatttaacttagttatt
aatgatccagaattgcaaactgctagggtacttccacaactgcatactctgatttggaat
aacgaacgggggaaatag
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