Pectobacterium polaris: BJK05_13020
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Entry
BJK05_13020 CDS
T05195
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00300
Lysine biosynthesis
ppoa00550
Peptidoglycan biosynthesis
ppoa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BJK05_13020
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJK05_13020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppoa01011
]
BJK05_13020
Enzymes [BR:
ppoa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BJK05_13020
Peptidoglycan biosynthesis and degradation proteins [BR:
ppoa01011
]
Precursor biosynthesis
Amino acid ligase
BJK05_13020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Tudor_FRX1
Motif
Other DBs
NCBI-ProteinID:
ASY80861
UniProt:
A0AAW5GA59
LinkDB
All DBs
Position
complement(2972641..2974128)
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AA seq
495 aa
AA seq
DB search
MADRNLRDLLAPWVQDTPACALREMTLDSRVAAAGDLFVAIVGHKADGRRYIPQAIAQGV
AAIVAEAEGEAADGTVREMHGVPVVYLSNLNQRLSALAGRFYQQPAEKLQLIGVTGTNGK
TTTTQLLAQWSQALGETSAVMGTVGNGLLGRAIPTENTTGSAVDVQQVLSQLVEQGATFA
AMEVSSHGLVQHRVAALPFAAAVFTNLSRDHLDYHGDMESYEAAKWALFAEHSVGQMIIN
ADDEVGLRWLAKLPDAVAVTMENNLVPGCRGRWLKATQIDYHDNGATIAFDSSWGHGEIE
SRLMGAFNVSNMLLALATLLSLGYPLDKLVIAGSHLQPVCGRMEVFHAEGKPTVVVDYAH
TPDALEKALEAARLHCQGKLWCVFGCGGDRDKGKRPLMGGIAEQLADRVVVTDDNPRSEE
PQAIVADILSGLLDAGRVQVIHGRAEAVTSAIMQAQENDVVLVAGKGHEDYQLVGNQRLD
YSDRITVARLLGVIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtaatttgcgcgatttacttgcgccgtgggtgcaagacactccggcgtgc
gcgctgcgggaaatgacattagacagccgcgttgcggctgccggggatctgtttgtcgcg
attgtcgggcacaaagcagatggacggcgctatattccgcaggcaattgcgcaaggcgta
gcagcgattgttgccgaagcagaaggtgaagctgctgatggcaccgttcgcgaaatgcac
ggtgtgccagtggtatatctcagcaatctgaaccagcggctttctgcgctggcaggccgt
ttttatcagcagcctgcggaaaagttacagctgattggcgtaacgggaaccaacggaaaa
acgacgacgactcagcttctggcacagtggagtcaggcattaggcgaaacgagtgccgtg
atgggcacggtaggcaatggcctattgggtcgggcgattccgacagagaatacgacaggg
tctgctgtcgatgttcagcaggtactgagccagctggtagagcaaggtgcgacgttcgcc
gcaatggaagtgtcctcccacggtctggtgcagcatcgtgtggctgcgttgccgttcgcg
gcggcggtgttcactaacctgagccgcgatcatcttgattatcatggcgatatggaaagc
tacgaagcggccaaatgggcgctgtttgctgagcatagcgtcgggcagatgattatcaac
gctgatgatgaggttgggctgcgctggttggcgaagctgccggacgcggttgctgtcact
atggagaacaatctggtccccggctgccgtgggcgctggctgaaagcgacacagattgat
tatcacgacaatggtgccacgatcgcgtttgattcaagctgggggcatggcgaaattgaa
agccgtctgatgggcgcgtttaacgtcagcaatatgctgttggcgctggcaacgctgctg
tctctcggttatccgctcgacaaattggtcatcgcgggctctcatctgcaacccgtatgt
ggccgcatggaagttttccatgctgaaggaaaaccaacagtcgttgtggattacgcccac
acgccagacgcgctggaaaaagcgcttgaagcggctcgcttgcactgtcaggggaaactc
tggtgtgtgtttggctgtggtggcgatcgcgataaaggtaagcgcccacttatgggtggc
atcgcagaacaactggccgaccgcgttgtggttaccgatgataacccgcgtagcgaagaa
cctcaggcgatcgtggccgatattctctccgggctgctggatgccggacgcgttcaggtg
attcacggacgtgctgaagcggttaccagcgcgatcatgcaggcgcaggaaaatgacgtg
gtgctggttgcgggtaaagggcacgaagattaccaactggtgggcaatcagcgtcttgat
tattccgatcgcatcaccgttgcccgcctgctgggggtgattgcatga
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