Peterkaempfera podocarpi: AB0761_18305
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Entry
AB0761_18305 CDS
T11007
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB0761_18305 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppod03400
]
AB0761_18305 (nth)
Enzymes [BR:
ppod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB0761_18305 (nth)
DNA repair and recombination proteins [BR:
ppod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB0761_18305 (nth)
Prokaryotic type
AB0761_18305 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
C7_FIM2_N
Motif
Other DBs
NCBI-ProteinID:
XHM92235
LinkDB
All DBs
Position
complement(4176627..4177469)
Genome browser
AA seq
280 aa
AA seq
DB search
MAKSGGSVAAGVAGGPGFKKAKVPGTHTGLVRQARKINRELAEVYPYAHPELDFENPFEL
LVATVLSAQTTDLRVNLTTPALFAKYPTPEDMAAANPEELEELIRPTGFFRAKAKSLLGL
SAALRDRFAGEVPGRLEDLVTLPGVGRKTANVVLGNAFGVPGITVDTHFGRLAHRFGWTR
ESDPERIEAAVAELFPKSEWTMLSHRVVFHGRRICHARKPACGACPIAELCPAYGEGETD
PEKAKKLLKYEMGGQPGQRLKPPADYPGEAAARKVLEEDS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagtggcgggtccgtggctgctggtgttgctggtggtccggggttcaagaag
gcgaaggtgccggggacgcacaccgggctggtgcgccaggcacggaagatcaaccgggag
ctcgcggaggtctatccgtacgcccatcccgagctcgacttcgagaaccccttcgagctg
ctggtggccaccgtgctgtcggcgcagaccaccgacctgcgggtgaatctcacgaccccc
gcgctgttcgccaagtacccgacgcccgaggacatggccgcggccaaccccgaggagctg
gaggagctgatccggccgaccgggttcttccgggccaaggccaagtcgctgctggggctc
tccgctgcgctgcgcgaccgtttcgccggggaggtgccggggcggctggaggacctggtc
accctgcccggggtgggccgcaagacggcgaatgtcgtgctgggcaacgccttcggcgtg
cccggcatcacggtggacacccacttcggccggctggcgcaccgcttcggctggacccgc
gagagcgacccggagcggatcgaggcggccgtggccgagctcttccccaagagcgagtgg
accatgctgtcgcaccgggtggtcttccacggccgacggatctgccatgcccgcaagccg
gcgtgcggggcgtgtccgatcgctgagctgtgcccggcgtacggtgagggcgagaccgat
ccggagaaggcgaagaagctcctcaagtacgagatgggcggccagcccggccagcggctg
aagccgccggccgactatcccggcgaggccgcggcgcggaaggtactggaggaggactcc
tga
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