Pollicipes pollicipes (gooseneck barnacle): 119107386
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Entry
119107386 CDS
T08250
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04120
Ubiquitin mediated proteolysis
ppoi04140
Autophagy - animal
ppoi04144
Endocytosis
ppoi04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119107386
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119107386
04140 Autophagy - animal
119107386
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119107386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119107386
04121 Ubiquitin system [BR:
ppoi04121
]
119107386
Enzymes [BR:
ppoi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119107386
Membrane trafficking [BR:
ppoi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119107386
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119107386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-RING_2
zf-C3HC4_2
Sina_ZnF
zf-rbx1
U-box
DM
zf-TRAF_2
CEP104_ZnF
zf-RING_5
MATH
Csm1_N
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
119107386
NCBI-ProteinID:
XP_037086715
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MGTLEESSFTNDQDDTNWMTSTNIAGYDFEFDPPLESKYECPICLMCQRDCVQTSCGHKF
CGPCILAWLRREREQCPQDNQPLTENDIYPDNYTRREILQLRVHCPNSKNGCPAAVELAN
VDRHLAECEYQIVPCPNRCSMRTMKREVADHCQSSCLRRLVNCSLCSEQFQLNQQKSHLN
TCPLVALTCEACQTVVPRQEMQHHLAEECPRTVVPCTFHEVGCKERMVRDDLPIHLQENT
QNHMKMLVLSYKNVSGFMSDLGRAVGALSSPLASPSLNRQGSTTSCAGEMQRQWSCSSIQ
EGACANTVHHRSVSVPSVPVEGARGASELEQRLQMDFSKLDLGKKSISPEKVIKDICEKN
VRLDQRSREQAIQIQNLRAQLKELKEASRRATQVPHEMLGRCCNGTFVWRFHNFSAEIRE
MEENSAKVVHSPSFYTAPFGYKLCLRANLYQRDGDRYLALFIHMRRGDNDDILEWPFSGR
FIVSLIDQTNNPVRHDFTEVMLTKPGLEAFERPRDDRNVKGWGFTQFMLLTRVRSHYLRR
DTVIVKCVVQVGNGYREEAIPAGR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccttggaggagtcatcgtttacgaatgaccaggatgataccaactggatgaca
tccaccaacattgccggctacgacttcgagttcgatccgcctctcgagtccaagtatgag
tgccccatctgtctgatgtgccagcgcgactgcgtgcagacctcgtgcggccacaagttc
tgcggcccctgcatcctcgcctggcttaggcgggagcgggagcagtgtccgcaggacaac
cagccgctgaccgagaacgacatttacccggacaactacacacgccgagagatcctgcag
ctgcgtgtgcactgtcccaacagcaagaacggctgcccggccgccgtcgagctggccaac
gtggaccggcacctggccgagtgcgagtatcagatcgtaccctgtcccaatcgctgctcg
atgcgcaccatgaagcgggaggtggccgaccactgccagagcagctgcctgcgtcgcctg
gtcaactgttcgctctgcagcgaacagttccagctcaaccaacaaaagtcgcacctgaac
acgtgcccgctggtggcgctgacgtgcgaggcgtgccagacggtggtgccgcgccaggag
atgcagcaccacctggccgaggagtgtccacgcaccgtcgtaccctgcacgttccacgag
gtcggctgcaaggagcgcatggtgcgcgacgacctgcccatccacctacaggagaacaca
caaaaccacatgaagatgctggtgctctcctacaagaacgtgtctggcttcatgtcggac
ctgggccgggcggtgggcgcgctctcgtcgccgctggcctcgcccagcctgaaccggcag
ggcagcaccaccagctgcgctggcgagatgcagcgccagtggagctgctcttccatccag
gagggtgcctgcgccaacacggtccaccaccggtccgtctcggttccgtccgtgccggtg
gagggtgcgcggggagccagcgagctggagcagcgcctccagatggacttcagcaagctg
gacctcggcaagaagtccatctcaccggagaaggtcatcaaggacatctgtgagaagaac
gtgcgtctggaccagaggtcgcgtgagcaggccatccagatccagaatctgcgcgcccag
ctgaaggagctgaaggaggcgagccgacgcgccacgcaggtgccacatgagatgctgggc
cgctgctgcaacggcaccttcgtctggcgcttccacaacttcagcgccgagattcgggag
atggaggagaactcggccaaggtggtgcactcgcccagtttctacacggccccgttcggt
tacaagctgtgcctgcgtgccaacctgtaccagcgcgacggcgaccggtacctggcgctc
ttcatccacatgcgccgcggcgacaacgacgacatcctggagtggcccttctcggggcgg
ttcatcgtctcgctgatcgaccagaccaacaaccccgtccgtcacgacttcaccgaggtg
atgctgaccaagcccggcctggaggcgttcgagcggcctcgcgacgaccgcaacgtcaag
ggctggggcttcacgcaattcatgctgctcacccgcgtgcgcagccactacctgcgccgg
gacaccgtcatcgtcaagtgcgtcgtccaggtgggcaacggttaccgtgaggaagccatc
ccggccggccgctag
DBGET
integrated database retrieval system
