Pollicipes pollicipes (gooseneck barnacle): 119114831
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Entry
119114831 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119114831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119114831
Spliceosome [BR:
ppoi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119114831
Complex C
U5 SnRNP specific factors
119114831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Phage_tail_X
Motif
Other DBs
NCBI-GeneID:
119114831
NCBI-ProteinID:
XP_037094775
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MDGELYDEFGNYIGPELESDEDEPDEAELARQQLVPAGGDEADEPADDMDAEDAEPAQLA
VVLHEDKKYYPSAEEVYGADVETLVQEEDAQPLTQPIIAPVRRNKFSHVEQELPETVYEI
EYLADLMDNAALIRNVGLVGHLHHGKTSFVDCLMQQTHPELRTLDDRPLRYTDTLFTEQE
RGVSIKATPLTLVLQDCRSKSYLLNLFDTPGHVNFSGEVTAAARLCDGVVLFVDASEGVS
LNTERLLKHAVQEGLAVTLCINKIDRLVLELKLPPQDAYYKLRHVIEEVNSLISVYAGEE
DAKPVSPLLGNVCFASSQYSICFTLKSFATLYTKTYGSEVDAADFARRLWGDMYFNAKTR
RFTKKPAHGSAQRSFVEFILEPLYKLLAIVVGDVDTQLPALLDELGVHLNKEERRLNIRP
LLRLICSRFLGDFTGFTEMCVEHIPSPAENARHKIAQTYSGPQDSPLAAAMADCDADGPL
MVHTTKQYPTVDATCFHVLGRVLSGTLHADQTVRLLGEKYTLADEEDSRIVNVGRLWVHE
ARYNVEVNRVPAGNWVLIEGVDQPIVKTATITDTEDREVFIFRPLQFNTQAVIKIAVEPV
NPSELPKMLDGLRKVNKSYPLLSTRVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKV
ADPVVSFCETVVETSSLKCFAETPNKRNKVTMISEPLEKGLAEDIENQVVQIGWNKKRLG
EFFQTKYDWDLLAARSIWAFGPDPTGPNILVDDTLPSEVDKTLLGAVRDSIVQGFQWGTR
EGPLCEEPIRNVKFKILDAVIASEPIHRGGGQIIPTSRRVAYSAFLMATPRMMEPYYFVE
VQAPADCVSAVYTVLARRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQA
FCLSVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDD
PMLLELARQDVMLNYPM
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgaactgtatgatgagttcggcaactacatcggacctgagctggagtcggac
gaggatgagccggacgaggctgagctggcgcgccagcagctggtgccggccggcggcgac
gaggccgacgagccggccgacgacatggacgctgaggacgccgagccggctcagctggct
gtcgtgctgcacgaagacaagaagtattacccgagcgccgaggaggtttatggcgccgac
gtggagacgctcgtgcaggaggaggacgcgcagccactcacgcagcccatcatcgcgccg
gtccggcgcaacaagttctcgcacgtcgagcaggagctgccggagaccgtgtacgagatc
gagtacctggccgacctcatggacaacgcggcgctgatccggaacgtgggcctggtcggc
cacctgcaccacggcaagacgagcttcgtcgactgtctgatgcagcagacgcacccggag
ctgcgcacgctggacgaccggccgctgcgctacactgacacgctcttcaccgagcaggag
cgcggcgtcagcatcaaggccacgccgctgacgctggtgctgcaggactgccgcagcaag
tcgtacctgctgaacctgttcgacacgcccggccacgtgaacttctcgggcgaggtgact
gcggcggcgcgcctctgcgacggcgtcgtgctgttcgtggacgcttcagagggcgtgagc
ctcaacacagagcgcctgctcaagcacgccgtgcaggagggcctcgctgtcacgctctgt
atcaacaagatcgaccggctggtgctagagctgaagctgccgccgcaggacgcttactac
aagctgcgccatgtcatcgaggaggtcaactcgctaatcagcgtgtatgccggcgaggag
gacgccaagccagtctcgcccctgcttggcaacgtctgcttcgccagctcgcagtactcc
atctgcttcacgctcaagtcgttcgccacgctgtacaccaagacgtacggctcggaggtg
gacgcggcagatttcgcgcgtcgcctctggggcgacatgtactttaacgccaagacgcgc
cgcttcaccaagaagccggcgcacggctcggcgcagcgcagcttcgtcgagttcatcctg
gagccgctgtacaagctgctggccatcgtggtcggcgatgtggacacgcagctgccggcg
ctgctggacgagctgggggtgcacctgaacaaggaggagcgccggctgaacattcggcct
ctgctgcggctcatctgctcgcgcttcctcggcgacttcaccggcttcaccgagatgtgc
gtggagcacatcccgtcgccggcggagaacgcgcgccacaagatcgcgcagacgtacagc
gggccgcaggactcgccgctcgccgccgccatggccgactgcgacgccgacggcccgctc
atggtgcacacgaccaagcagtacccgaccgtcgacgccacctgcttccacgtgctgggc
cgcgtgctgtcgggcacgctgcacgccgaccagacggtgcgcctgctgggcgagaagtac
acgctggccgacgaggaggactcgcgcatcgtcaacgtcggccggctctgggtgcacgag
gcgcgctacaacgtggaggtgaaccgcgtgccggccggcaactgggtgctgatcgagggc
gtcgaccagccgatcgtgaagacggcgaccatcacggacacggaggaccgcgaggtgttc
atcttccggccgctgcagttcaacacgcaggccgtcatcaagatcgccgtcgagccagtg
aacccgtccgagctgcccaagatgctggacgggctgcggaaggtgaacaagtcgtacccg
ctgctgagcacgcgcgtggaggagtcgggagagcacattattctgggcacgggtgagctg
tacctggactgtgtgatgcacgacctcagaaagatgtactcggagatcgacatcaaggtg
gccgatccggtggtgtcgttctgcgagaccgtggtggagacgtcgtcgctcaagtgcttc
gccgagacgccgaacaagcggaacaaggtgacgatgatctcggagccgctggagaagggt
ctggccgaggacatcgagaaccaggtggtgcagatcggctggaacaagaagcggctcggc
gagttcttccagaccaagtacgactgggatctgctggcggcgcgctccatctgggcgttc
gggcccgatccgaccgggcccaacatcctggtggacgacacgttgccgtcggaggtggac
aagacgctgctgggcgccgtgcgggactccatcgtgcagggcttccagtggggcacgcgc
gagggcccgctctgcgaggagccgatccgcaacgtcaagttcaagatcctggacgcggtg
atcgcgagcgagccgatccaccgcggcggcggccagatcatccccacgtcgcgccgcgtc
gcctactcggccttcctcatggccacgccgcgcatgatggagccctactacttcgtggag
gtgcaggcgccggccgactgcgtctcggccgtgtacacggtgctggcgcggcggcgcggc
cacgtcacgcaggacgcgcccgtgcccggctcgccattgtacaccatcaaggcgttcatc
ccggccatcgactcgttcggcttcgagacggacctgcgcacgcacacgcagggccaggcg
ttctgcctgtcggtgttccaccactggcagatcgtgcccggcgacccgctcgacaagtcg
atcgtcatccggccgctggagccgcagccggccacccatctggcgcgcgagttcatgatc
aagacgcgccgtcgcaagggcctcagcgaggacgtgtccatcaacaagttcttcgacgac
cccatgttgttggagctggcgcggcaggacgtcatgctcaactatccgatgtga
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