Pectobacterium polonicum: LW347_05985
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Entry
LW347_05985 CDS
T08488
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo01501
beta-Lactam resistance
ppoo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LW347_05985
01503 Cationic antimicrobial peptide (CAMP) resistance
LW347_05985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppoo03036
]
LW347_05985
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoo02000
]
LW347_05985
01504 Antimicrobial resistance genes [BR:
ppoo01504
]
LW347_05985
Chromosome and associated proteins [BR:
ppoo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LW347_05985
Transporters [BR:
ppoo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LW347_05985
Antimicrobial resistance genes [BR:
ppoo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LW347_05985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
EAD11
Motif
Other DBs
NCBI-ProteinID:
UVO09513
UniProt:
A0AAE9NU12
LinkDB
All DBs
Position
complement(1333765..1334961)
Genome browser
AA seq
398 aa
AA seq
DB search
MNKNRGLTPLAAVLMLSGGLMLAGCDSGNNQQGGGAQQQMPEVGIVTLKTEALNVMTELP
GRTSAYRIAEVRPQVGGIILKRNFVEGSDVKAGASLYQIDPATYQANYNSAKGSLAQAQA
QAEIARLTVNRYKPLLGTNYVSKQDYDQAVATSRQADAAVLAAKAAVDTAQINRAYTKVN
SPIEGRVGRSTVTEGALVGTGQTSALTTVQQLDPIYVDVTQSSNDFLQLKKELENGTLKQ
DQGKANVRLLLENGTEYAAAGTLEFSDVTVDETTGSITLRAIFPNPQHNLLPGMFVRARL
DSGVNPTALLVPQQGVTRDPRGQATAMVVGEGDKVEPRTLKTSKAVGDKWLVTEGLKAGD
RVIVTGLQKIRPGAQVKTKEVAPENQQAPQASAEPAKS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagagggctaacgcctctggcggcagttctgatgctttctggcggctta
atgctcgcaggatgtgatagcggcaacaatcagcagggcggcggcgcacagcagcagatg
cctgaagtggggattgttacgttgaaaacggaagcactgaatgtcatgaccgaactgccg
ggccgtacaagtgcttaccgcattgctgaggttcgcccacaggttggcggaattatccta
aaacgtaacttcgttgaaggatctgacgttaaagctggtgcatcgctctatcagatcgat
cctgcgacctatcaggcaaactacaacagcgccaaaggctctcttgctcaagctcaagct
caggcagaaattgcccgtctgacggttaaccgctataagccgctgttgggcactaactac
gtcagcaagcaggattacgatcaggctgtcgccacgtcccgtcaggctgatgctgccgtt
ctggctgccaaagcggcagtggacaccgcgcaaatcaatcgggcttacaccaaagttaat
tcgccgatcgaaggccgcgtaggaagatcaacggtaacagaaggcgcattagtaggaacc
gggcaaacgtcagcattaacgaccgtgcaacagcttgatccgatctatgttgatgtcacc
caatccagtaatgatttcctgcaactgaaaaaagagctggaaaacggcacgctgaagcag
gatcaaggtaaagcgaatgtgcgtctgctgttggaaaacggtactgaatatgcagcagcg
ggtacattggaattttctgatgttacggtagatgaaactactggctccatcacactgcgt
gccattttccctaacccacagcataacctgctgcccggcatgtttgttcgtgctcgcctc
gattccggtgttaatccgaccgccttattagtaccacagcaaggtgtcacccgcgaccca
cgtggtcaggctactgcgatggtggtgggagaaggcgataaagtggaacctcgcacgctt
aaaaccagtaaagccgttggtgacaaatggttggttaccgaaggcttgaaagcgggcgat
cgcgttattgtcaccggtttgcaaaaaatcagacccggtgcacaggtgaaaactaaagaa
gtcgctccagaaaatcagcaggcgccgcaagcgtcagcagaacccgcgaagtcttaa
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