Physcomitrium patens (spreading earthmoss): 112274712
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Entry
112274712 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13138
integrator complex subunit 1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112274712
Spliceosome [BR:
ppp03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112274712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INTS1_R4
INT1_R3
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
112274712
NCBI-ProteinID:
XP_024360181
UniProt:
A0A7I4D9I5
LinkDB
All DBs
Position
2:complement(381871..399270)
Genome browser
AA seq
2459 aa
AA seq
DB search
MKRHSQPDEDETPEASHQTKTRRISPTGRRVSDEEGSGDLDLNATPLGFDLNAPVEEEDV
LQANNNWLSSHQDVENKAEIDEALRINSLPSEASSLDQSKAETVPLVGHDSVQAVIKSED
VYEPRHPIPDEDPVGLSPKEEEGSDQGESPFVKAEEIEDLEEKPQVTVPAVFCRPFEPLN
LTASDEELEILRSVWSAWQQEDVEALDMTMADTLEELGKHALNPNRYLLLSSIYVAKKLP
EAFSLPRTVKVLLTFLESAAAQTVVKRQSLLPMLACKLLFRAFAGEPDWPIEFVQVYLLD
STGSRAWIDHEGCKEFVSNVLTAFPDSVLDVSEDTTGPKSSEQVGTGDSQQIQGVKAEGH
GMQSAIKNRYSQGEMQQKVRAEFCQSLNQLLGAAMSKENPRQLIRLLMQGAGFEEVRVVA
SSMLEGWLNNPVHLRSAKTLLDRILQHTRGTSENDFNTVANLLALRVSSTQAPGQIKTIH
NNIFSEMITQLVRRRPEYATLALKTFVTTELQSKNPHNIKSIITVLKAVPSEDNPPEYEL
ANILQELAASDESRGLLCDFVRRMMKQAGGEFDVHALCHGLIQPWPLMAEQEESLKEAWI
NKLVDLTCQLLLHAAAPFVEDEGLFNTVTSSSHLGTTSGTSVSGFGLERSSSGGPLRDKL
ATLEKLSIETQNFQMQAMAWCTDVLALYLPHIGHAHFKKIVRQLLFLEEAEAYFSHVDPA
MDAESKCVKLLGACTRAPEEIVARLILMGISNFPMEPAESLDIIEVLVCRAAKLERFMEG
SLVASSSQLPAAIFKLASFNLRGVTRQPLPQLVVKDMYWKACLVVLIVAVFNLTTIGNFV
WESIPSLRSLMEVLIAGDKAFRSNSCSEASQLEFEKTEADAEQLDMKAEEAVKKNLAEKK
SSESSMVDGDDLESSETEWKGKLMILNHSGPIRRPTQVVYDKLNKLDEMFQLGHLLRKCR
NPDFFSKVTALQTMQQAWPWLQSIVSREPEVIFYLPTAWQCELLYMLEGSHPTTQMLSVD
LLQLQAELRETVTTPSNEKEIETIIGFLAQKLMAKQFSVRSRARRCLSSLFHTTPKQHDT
QVSLPPSPREHKRTDTASGITSRWPVHAMDTAQPHHSKKLMVGSSGTSSLHVSPGISSGL
VVATSSAERIRAFSQYSGFEDYTAWLTSLESLPTASRLIAVLLPSIQVAIQQETSVSVVV
AYLEFLKKHASPLPSQQSMACILATFIMQRKMLTASLLSGPSTLPSAFVSACVESKSHSN
IVDLILESLCEALETGTHPDSVTDEAASHSHMVTLASPQNLGNEQVVRRVNLQKVVVDAS
LKVLSLLALKHSDVDEEKQGFSRLLSILFPDTQFSVAWLEGRKGEKLPLLSEDQALLFAR
CNVAKLIRAGLAALSLRSKLDLCEKLSLSSTAATALLQDLDAVSQVRLEAELGPRGSFCR
HAKKLQKCVRALMQPGNPSGVYFSGFLDAYAPPAVRDVSQPQILLPPSKLEYSDDVARND
SGNARALTGEELANQLIIWLKLLPVGTFSSDRTNIGLELTKTSPYLDFRHTVQQALLCAN
DDNESTVVSSVTACVRSLESLHFHESLLLILPILNILQRINSRNLQELLSAFISRIETGV
EANNLYDRILNQKIIFKKKNLLQMNELKCNESSTDQLVRIVKNLTLRKFSQVPLHRIERI
LRYALSAKLNYVPVNSEDGVRQVPEGAGSEYVNETLILEMLDLLRAWKPNRGNVHKSLDL
KEQVELVGRCALVCEYLMFLDPEFLSTSHLSSLFEDSFLYKNTTVFSIPKLALDLITLRS
SWQSISRILKVILGVFVKQNEGIREGKIPDTSEATSARFVREEVREDPYLQKVPRREVFD
EAGSILEFILLCVRHPRTILACRLNDELDPFGSTKTILSSFDHGLEEALATIAIADLMVA
RSSTLQFHHNSDESDYSGKFSLSTCVVDQPALVSSSRAMQVLLVAACQGKRFLSTIIEQL
NRVGQGSFADVLFSLNSKSEAKESTRKAAAGAAQELLAGLYVAFPVSVRTVLQSLKDKKC
QAIDLSSLLQDHKFISRTFTQTCTLNNTLHRALRSICKGCEKEAKAAYGFCHDMARQHPA
LLVPHLPTFSVLLKEMLPSVKLQDTQIRTTVARTYTLGISLLDALRPYLLADNQNNLPMS
SRKASLEAMLGFYFEFLQCLEIPDRPQFAKVVARLADFLCHCVDAGGFYRDYVLSYRTPV
LQTCAQTFHKIKKLGFLLGMLDKPVQTWANTVPKSSSSADEGKTSMGGNLIGPPSLPLED
VLKVRTQLLQCIRWQGSKKPQDSRLELFNTRVNSYSVWYEMKGLDVEEVNLTATLLDLER
ASARMPMILSALEDSLLELTDVSDSNVRDRAYVLLERLLLHCPSESSATNILQRLLQQLS
SSDTSLAKTAARQAVRFFYYCSEFQETILVEMLQMGRFASEDLQQLLLGLFTVSGGPLQ
NT seq
7380 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcatagtcagcctgatgaagatgagacgcctgaagcttcgcaccagacaaag
acccgtcggatatcacctacgggaaggagagtaagtgatgaagaaggatcaggtgatctt
gatttgaatgctacccctctaggattcgacctcaatgctccagtggaagaggaggatgtc
ttgcaagccaacaacaactggctgagttctcatcaggacgtagagaacaaggctgaaatt
gacgaggcattgagaataaattctcttccatcagaggcttcatctcttgatcaatcgaag
gcagaaactgtgcctctcgtaggtcacgatagtgtgcaggcggtgataaagtcggaggat
gtctatgaacctcgacatccaatccctgatgaagatcctgttgggcttagtccgaaagag
gaagagggctcagatcaaggggagtccccgttcgtgaaagcagaggaaatcgaggatttg
gaagagaaaccccaagttacagttccagctgttttctgtcggccatttgaacctttaaac
ctcaccgcatctgatgaagaactggaaatccttagatccgtgtggagcgcgtggcagcag
gaagatgtggaggctctagatatgacaatggcagacacgttagaagagctaggaaagcat
gctttgaatcctaatcgttatcttcttctgagctctatatatgtagcaaagaagcttccc
gaagcattcagcctacctcgaacagtcaaggtcttgctcaccttcttggaatcagcggct
gcgcaaacagtggttaagcgtcaaagtttgcttccaatgctggcgtgcaaacttctcttt
cgagcttttgctggagaacctgactggccgattgagtttgtacaggtttatctgttggat
tccactggttctcgtgcctggattgatcatgaaggatgtaaggagtttgtctctaatgta
ttgacggcttttcccgactcagtgctcgatgtttctgaggacaccactggtccgaaatct
tcggaacaagtaggaactggagattcgcagcaaattcaaggtgttaaagcagaaggtcat
ggcatgcagtcagcaattaaaaataggtattcacaaggagaaatgcaacagaaagttcga
gccgagttttgtcagtctctaaatcaactgttaggagcagcaatgtccaaggaaaaccct
cgacaacttataaggctactcatgcaaggtgctggctttgaggaggtaagagtggtggct
tcaagtatgttagagggttggttaaacaacccagttcacttgcgatctgccaaaactctc
ctagatcggattcttcagcatacgcgtggaacgagtgaaaacgattttaatactgttgca
aacttgctcgctcttcgcgtttcctcaacccaagctcccgggcagataaagactatacac
aacaacattttctctgaaatgatcactcagcttgtgaggcgtagacctgagtatgcaacg
cttgctttgaagacatttgttacaaccgaattacaaagcaaaaatccccacaatatcaag
agtatcattacagttttgaaagctgtgccatctgaagacaatcctccagaatacgagctt
gctaatattttacaggagctagcagctagcgatgaatctcgtggtctcctatgtgacttt
gtacgaaggatgatgaagcaagcaggtggtgagtttgatgtccatgctttatgtcacggt
ttaattcagccatggccacttatggctgagcaggaggagtcacttaaagaggcttggatt
aacaagctggtggatctcacatgtcagttactgcttcatgctgctgccccctttgtagag
gatgaaggcttgttcaatacagtcacctcatcatcacatttgggtactacttcagggacg
tctgtttctggatttggtttagagaggtcaagctctggtggtcccttaagagacaaattg
gccacgttggaaaagctcagcattgagacacaaaactttcagatgcaagccatggcctgg
tgcactgacgttttggcattatatctaccacatattgggcatgcacatttcaagaagata
gtgcgtcagctgctgtttctagaagaagcggaggcatacttttcacacgtggatccggca
atggacgcggaatcaaagtgcgtcaaattgctgggagcatgtacaagagcaccggaggag
attgttgcacggttgatcctgatgggaatttctaactttccaatggaacctgctgaatca
ctggatattattgaagttctcgtctgccgagctgcgaagcttgaaaggttcatggagggc
tctcttgttgcttcaagttctcagttgccagccgctatattcaaactcgcatcatttaac
ttgcgaggtgtcactcggcagcctttaccgcagcttgtggtgaaagatatgtattggaag
gcctgcctcgtggtgctcattgtagctgtttttaatcttactaccattggtaattttgtg
tgggaaagcattccttctcttagaagcctgatggaggtcctcattgctggtgacaaagct
ttcagatccaacagttgcagtgaagcttcgcagttggagtttgaaaaaacagaagcagat
gcagagcaactcgacatgaaagcagaggaggcagtaaaaaaaaatttggctgaaaagaaa
agttcggaatctagtatggtagatggagatgatctggagagctcagagactgagtggaag
gggaagttaatgattttgaaccactctgggcccatacgcagacctacccaagttgtatat
gacaagctgaataagctcgatgaaatgttccagctaggacatctgttgagaaaatgtcgc
aatcctgactttttctcaaaggtgactgctcttcagactatgcaacaggcctggccgtgg
ttacaaagtattgtatcaagggaacctgaagtgattttttacttacccactgcctggcag
tgtgagcttctgtacatgctagaggggagtcatcccaccacgcagatgttatcagtggac
cttttgcagctgcaagcagagttacgtgagaccgtcaccactccaagcaacgagaaggaa
atcgaaaccataattggctttctcgctcaaaagcttatggccaaacaattttctgtccga
tctcgtgcacgaaggtgcctaagtagcttatttcatactactcctaaacaacatgacacc
caagtttcacttcctccatcaccacgagaacataaacgtacagatacagcttctggaata
acaagtagatggcctgttcacgccatggacactgcacaacctcatcactccaaaaaatta
atggttggatccagtgggacctcatctttgcatgtttcaccaggaatttcctctggattg
gttgtcgctacatcttctgcagagcggataagggcgttttcgcaatattcgggctttgag
gactatacagcttggttgacctcactggaaagtttaccgacagcctcaaggcttatagct
gttttattgccttctatacaggttgctatacagcaagaaacttctgttagtgtggtggtt
gcgtatctagaatttttgaaaaaacacgcatcacctcttccttcgcaacaatctatggct
tgcatacttgcgactttcattatgcaaagaaaaatgctcactgccagcctcttgtcgggc
ccatcgacactccctagtgccttcgtctcggcatgtgtggaatcaaagtctcattctaat
atagtagatttgattctggagtctctttgtgaagctttagaaactggtacgcatcctgat
tcagttacagatgaggccgcttcccactcccacatggtaacacttgcgtctccacaaaac
cttggaaatgaacaagttgttcgacgagtaaatctacagaaggtagtagtagatgcttca
cttaaagtgctgtctctcttagccttgaagcatagtgatgtcgatgaagagaaacaaggg
ttttcgaggctgttgagcattctatttccagatacgcagttttctgttgcttggctcgaa
ggaaggaagggagagaagttgcctttactttcagaggatcaggcacttctgtttgcacga
tgcaatgtggcaaagcttatacgtgcaggtttggcagcattatctcttcgatccaagctc
gacctatgcgaaaagctgagtttatcttcaacagccgcaacagcccttctgcaagatctt
gatgctgtgtctcaagtcaggttggaagcagagctgggtccaagaggttccttctgccgg
catgctaagaaacttcagaaatgcgtgcgtgcacttatgcaaccaggaaacccatcgggt
gtttatttttcaggttttctggatgcatatgctcctccggctgtgcgagacgtatcacaa
cctcagatacttttgcctccttcaaaacttgaatattcggatgatgtggctagaaatgat
tctgggaatgcaagagctttgacaggggaggagctggctaatcagttgattatctggctg
aaactgctgcccgttggaacattctcgtctgaccgtactaatattggtctagaacttacg
aagacatcaccttatttggattttagacacaccgtacaacaagccttattgtgtgccaat
gacgataacgagagtaccgtagtatcatcagttactgcttgtgtgcgttcgctagaaagt
cttcattttcatgagtcattattattaatccttccaatcctcaacattcttcagagaatt
aacagtcgtaatcttcaggaacttttgagtgcatttatatcccggatcgagactggagtt
gaagctaataacttatatgataggattttgaaccaaaagataatcttcaaaaagaagaac
ctcctacaaatgaatgagcttaaatgtaatgagagtagcaccgatcaattagttcgtatc
gtcaaaaatttgaccctaagaaaatttagtcaagttcctttacacagaatagagaggatc
ttacgctatgcacttagtgcaaaattgaattatgttccggttaacagtgaagatggtgtt
agacaagttcccgagggtgcaggctcagaatatgtgaatgaaacgttgattttggaaatg
ttagatttactaagggcttggaaacctaatcgtggaaacgttcataagtctttagacctg
aaagaacaagtcgaactggttggacggtgtgctctcgtttgtgaatatctaatgttctta
gatcctgaatttttgtccacatcacatctttcttctctttttgaagactcatttttgtac
aaaaacaccactgttttctcaatccctaagctggccctggacctcatcaccctgagaagc
tcctggcagagtatatcaaggatactcaaagtcatcctgggagtatttgtgaagcagaat
gaaggtattcgtgaaggaaaaattccagacacaagtgaagctacgtccgcgcgttttgtg
cgtgaggaagttcgtgaagatccctacctccaaaaggtgccgaggagggaggtttttgat
gaggctggttcaatattggaatttattttgctatgtgtgcggcaccccaggactattcta
gcttgtcgcctaaacgatgaactggatccgtttggaagcaccaagacaattctttcctca
ttcgaccatggactagaagaggcattggcaacaatagcaattgcggacttgatggtcgca
agatcgtcaacacttcaatttcatcataattcagatgaaagtgactattctggcaaattc
tctttgagtacctgtgtggttgaccaaccagctttagtatcatcaagtagggctatgcaa
gtgctattggttgcagcttgtcaaggaaaacgctttctctcaactatcattgaacagctt
aatagagttgggcaagggagctttgctgatgtgctttttagtctaaactctaagtcagaa
gcgaaggaaagcacaagaaaagcagctgctggcgcagctcaagagcttttggcgggcctt
tatgtagcattcccagtttcagtccggacagttttgcagtctttaaaagataaaaaatgc
caagctattgacttgtcctccctcctgcaagatcacaaattcatatcaagaacatttact
cagacctgtacattaaataatactctgcaccgtgcattaagatctatttgtaaaggttgt
gagaaggaagccaaagcagcttacggtttctgccatgacatggccagacaacatccagcc
ttgctagttcctcatttaccaactttctccgtcttgctcaaggaaatgttgccttcagtg
aaactgcaagatactcaaattcgaacaacggttgcgcgtacttacacacttggcattagc
ttgctggatgctttgcgtccatacctgctggcagataatcagaacaatcttccaatgtcc
agcagaaaagcttctttagaggccatgttagggttttattttgagtttcttcaatgtctg
gagataccggaccgtcctcagttcgcaaaagtagtcgcccgtctagcagactttctttgt
cactgtgtagatgcaggtggtttttatcgagactacgtactgtcctatcgaacacctgtt
cttcaaacttgtgcacagacttttcataaaattaaaaaactaggcttccttcttgggatg
cttgacaagccagtacagacgtgggcaaataccgtaccgaaatcctcaagcagtgcagat
gaagggaagacttcaatgggtggaaacttgataggacctccatcgctacccctggaagat
gttttgaaggttcggactcaacttctgcagtgtatcagatggcagggatccaaaaaacct
caagattcaagactggagctgtttaatacaagagtcaattcatacagcgtatggtacgag
atgaagggactagacgtggaagaagtcaatctaacagccacgctcttagaccttgagaga
gcctcagcccgcatgcccatgatcctttctgcactagaggattctttactagaattaaca
gatgtcagtgattcaaacgtgcgagatcgagcctatgttcttcttgaacgtttgctactc
cattgtcctagtgagagcagtgccaccaatattttacagaggctccttcaacagctctcc
tcatcagatacctccctagctaaaacagctgctcgacaggccgttcgatttttctactat
tgttcagagtttcaggagaccatattggtggagatgttacagatgggtcgctttgcctca
gaagatttgcagcaactgcttctaggtcttttcacagtctctggtggccctttacaatag
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integrated database retrieval system
