Physcomitrium patens (spreading earthmoss): 112275291
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Entry
112275291 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04075
Plant hormone signal transduction
ppp04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112275291
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112275291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112275291
Transcription factors [BR:
ppp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112275291
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
DUF236
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
112275291
NCBI-ProteinID:
XP_024361305
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Position
2:6260977..6266429
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AA seq
729 aa
AA seq
DB search
MNRLVPEWDRSSGMLDDLIPSSGFHGPANGKLDFLRSKSTRFFQVPDQDTLEAGRIDNGH
IVMQGQTSKCGKPHWQVNYTSAWNSEQGTEDGVTPGKPVSPKSDAALEDVVNETATEAHP
THQIDAEHDEMVSWLQYPLDDTLERDYCSDFFGELPDSHIQLLRESFGQGAAKTLRTPYS
GAPGNDGFVNRASTADTAMMLGAGRAAGLLPQAGVEAFSKVRTIHSLQPSSVTRCQQPHP
SSSNGSTVCATANVTTTRAPTSVPTSATPSNPMLPPKTQPAAPTVNTQPSPPNNRPGSMN
FSHFSRPAAIIKANLHSLAGINAAPPPNARFKQQHSHLVKPTVEACTSTGSSIAESTSAG
NGQSGLHKDAKVQPLIMEREQSNGTEDSRWQVAPGLSPKKDRDCVVSGDCKNSPADQETC
RPSVVISDAVPASSEKGMSRITHHPDIQEPTITSSSGGYGTSTDRLKEAATSNKRKSNER
EETECQSEDGEDESVDTKKPVTGRGSTAKRSRAAEVHNQSERRRRDRINEKMRALQELIP
NSNKTDKASMLDEAIEYLKMLQLQLQMMSIRTGMTLPPMVMPASLQQHMQMPQIAAMPSM
GMGMGMVPMNLGHGMMMDMGVAAQGRAMMPLQSHVGPSLNGAIASASSMADVHDPRYQTS
GVMDPYNAYMTRQHQPMQMTQAVSIDKYNAYMLQQCQLQQHLRQHQQQPQHLQHQQHQQA
PNMNGGPPH
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcttgtgccagagtgggataggagcagcggcatgctcgatgatttgattcct
tcaagtggctttcatggaccagcgaatgggaaattggattttttgagatcgaagtcgact
cgcttttttcaagtacccgatcaagatacgttggaagcgggtaggatcgataatggacat
atagtcatgcagggacaaactagtaaatgtggcaagccacattggcaggtcaattataca
tcggcgtggaatagtgagcagggaactgaggatggggtgaccccgggaaaaccagtttcc
ccgaagagtgacgccgctctggaggacgtggttaatgaaacggccactgaagcgcatcca
acgcatcaaatcgatgcagagcatgatgaaatggtatcttggttgcagtatccactggat
gataccttggaaagggattattgctctgatttttttggagagctgccagattcccacatc
cagttgttgagagagtcttttgggcaaggagctgcgaagacattacgcactccttattct
ggagcaccagggaacgatggttttgttaacagagcttccaccgcggatactgccatgatg
ttaggtgccggacgcgcggcaggacttctacctcaggctggagtagaagcgttcagtaaa
gtgcgtacaatccactccctgcaaccttcttccgttaccaggtgtcaacaaccacatccc
agctcatcaaatggttccactgtgtgcgcgacggctaatgtgacaactactagggcaccc
acatcggtacctacttcggcaactccttcaaatcctatgttaccacccaaaactcagcct
gcagctcctactgttaatacgcaaccttccccacccaacaaccggccaggatctatgaat
ttttctcacttctcgaggcctgcagccataattaaggcaaatttgcacagtttggcaggg
ataaacgctgcgcctccacctaatgcacggttcaagcagcagcatagtcacttggtaaag
ccaactgtggaggcgtgcacatcaactggttcttctattgctgagtccacctcagcgggg
aatgggcaatcgggtttgcataaggatgcgaaggtgcaacctttaattatggagagggag
cagagtaatggcactgaggattctagatggcaagttgcacctggtctgtcaccgaagaag
gatcgagattgtgttgtgtcaggagattgtaaaaattctccggctgatcaggaaacttgc
cggccatcagttgtaataagtgacgctgtgccggcctcttccgaaaaaggaatgtcacgt
attacacatcaccctgatatacaagagccaaccatcacatcctcttcaggtggatatggg
acgagtacagacagactaaaagaggccgcgacaagtaacaaaaggaagtcaaatgagagg
gaagaaacggaatgccagagtgaagatggggaagatgagtcagtggacaccaagaaacct
gtaactggtcgtggaagtacagctaaaagaagcagggctgccgaagtccacaatcagtca
gaaagacggcgaagagaccgaataaatgagaagatgagagctctgcaagagctgatacca
aactccaataagactgacaaggcatctatgctggacgaagcaattgaatacctaaaaatg
cttcagcttcagctccagatgatgtcgatcaggacgggtatgactttgccaccaatggta
atgcctgctagcttacaacaacatatgcagatgccgcagattgcagcaatgccatctatg
ggaatgggaatggggatggtgccaatgaatcttggtcatgggatgatgatggacatggga
gtggctgcccaaggaagagcaatgatgcccttgcaatcgcatgtgggaccatccttgaat
ggcgctattgcaagcgcatcgtctatggctgatgttcatgaccctcggtatcaaacgtca
ggtgttatggatccttataacgcgtacatgactcgtcagcatcagccaatgcaaatgact
caggctgtcagtatagacaaatataatgcctacatgttgcaacagtgccaacttcagcaa
catctacggcagcaccaacagcaacctcaacacctgcaacatcaacagcatcagcaggct
cctaatatgaatggcggtcctcctcattaa
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