Physcomitrium patens (spreading earthmoss): 112278345
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Entry
112278345 CDS
T01041
Name
(RefSeq) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112278345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112278345
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112278345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_2nd
Big_2
Ig_NUP210_15th
Ig_NUP210_3rd
Ig_GP210_16th
Ig_NUP210_9th
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-GeneID:
112278345
NCBI-ProteinID:
XP_024367451
UniProt:
A0A2K1IA67
LinkDB
All DBs
Position
27:complement(805104..820194)
Genome browser
AA seq
2032 aa
AA seq
DB search
MMREKRGMVWPCQSRKRIHPFVALLVFLQFLCAWDSSGLVAAVGIVQHGPHISNLNVLLP
PRSSRPVHYHLQGYNGCFTWTWDHHDILQVDAQYNGTDKNCSTSAVLTSIAPFTGRKTTA
VHATDSVTGQILRCEVFIDKISRIQIFHHSLKLDLDGLATLRIRAFDTEDNVFSALAGLQ
FMWQLSPLSQTGDTSHRLLHVPLKHTSLIDGEIEDQIELEQNGLGSDLYVVRGVGAGQEK
VTAHFVEPGFENLSHIITLTVAEAVSLGPPSPVFMIPGTRLQFTLRALRRNEVKVISLPS
PHHRWSLDNSTVADIDTVSGFITARTYGSTVVTVEDLRLSGHQQTSTIHVVRPISLVLSL
SPLLGKETGAVSNVKQSVVLSDSNWQVVAGRKYVVQAFAFSKESGKKPLLLTKDNDLTMP
RAISPFWRMSKVPEAVVAEQGWRNCSLLEALSEGNGRLVASLGHGVMVHDPLSGSWLERN
KELLTTEEELTVCAQVKILRNHFGEYLGLPWAPGYEQLHHLSAEGGCGTKPTDYQWSSSN
PAVATVNVDGVVRTKGLGRAVIHATALGDVLNDDEIIVEVSYPTAIGIAPGLPVEVEVGS
YIPVAVGLRDSSGMEYASCDVLKNAVQWAIFGGDGQFSMVSEDAQMLSSAQEKAIQLIHP
RVCAWALISATRTGRATVRASLNIGELLVGFTSSEIEHPFLEASWPIAAFAPLTLEQAKS
GDGHGGYSHKLAGTRLVPLPSPESRHLKELLLVLRSSMKVFLCGGPERWRQGVEFVDTHE
VINEQGAAGKENIGVSHVQDGGNWVYNIECKSLGNSTIFFYRGNLVGEDHPTKSVVSVSL
SVTCSVPSAITLLIDEPENSMTSIKLAAHAERDKTNCQIAPVTVINDRSIRVAVVALDDA
RRPFSNASSLSVSWKLVGCKNLAQWVVEESNSNVVSNGWERKLALGNAAGECTVRADLHG
FASEYEGAFAMIPAWKSFAKSFGHLSDAVQLQLVAALRIEPSNFLLFHHPDSKASLSILG
GTNEVEARANDSRVVDVVLLDTRGLIVAARGLGSALITIRDVGLATPASASALVTVSDAA
AVRMLLPEDTSLQVGSCLVVKVEAADSSGRVFDSSQFIFMNLRVHLQDGVLITKPHTSAH
LAANEFVVCGANVGLTTTLHVSIRQRSDKEVFSDVARILVYAPLSIRPSALVLAPGAKYL
LVVDGGPQTGVVFNFDATHPEVVKIDPASGLLEAKAPGRATVQAQARNHNGELLSEAQLN
VTVQVPVSMILDVRGGQLAIGREITIFPHGFGENLFAFYDLCGNYKWSVGNDQVLGLAGI
DDFSGEEKNSALSEVASSRTKGWGKLDESSGTPYGFTARAIGKSAGRTTVTLSFNCQFHY
NGQKVEKEFKPSGTVWVVPDPPLSLGIGATWVLPPSYSSSPLLLQRERPVPEFSDPGRGG
GSVTYSVMHQSINDANVITLMESGTIQTSEKTEVACIHARDRSTGRSEVAACVRVAEVFS
LTVGDDILAVPLAELSVGTDQKLAVTLRDDLGVPFLEAGTTIPITLDTNRADLITVKVVD
VEIVGRSSKATILVKAVRQGSALVRVTYKNNPQIVDWIMINVGAYVYPRSPVLHIGNRLS
FSILGKGLHGLLTGERGSWYSSNASVVRVDSHSGEAQAIAEGVATVSFNGTRLTTYTTVN
VVRVASVHIEVPTGIISNVPTAREGYYFPVKFSDAYGRDIGIVGENREVSYSCQVQPSFI
GEAKAWREPGSGAFHCVFLPNQPAKLKEAYQKSVAQKHIAPKYLNGKLEFSMIVQVEGTS
GIEGSVKAWFAGGFEIVQSMPSQLTLTSKSKEWEFVVVGCVHPDIVRPTIPGQPEAFSIK
LQNPKVETDGAGGRALYKLKVVDESKPISDSLVIRSSLTGQELELPVCFKPGKSTIAGLT
AQIATTVVIIVLLMILPLVFCARLLDVQRSSLASRNVDTLPSEPAANGGQYETTPLRQRI
VGSPRTPQTPPSGGLGYRSPQQPYTEYVSRTLENTPYYSREGIRKYDPSFTY
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgagaaacgagggatggtgtggccttgtcagtcgcgaaagcggattcatccg
tttgttgccttgcttgtgttcctccaattcctgtgtgcttgggactcgagtgggctcgtt
gcggcagttggaattgtacagcatggtccacacataagcaatttaaatgtccttcttcct
cctcgcagttctcgtcccgttcattatcatctgcaaggttataacggctgtttcacctgg
acctgggatcatcatgatattcttcaagttgacgcccaatacaatggcacagacaagaat
tgctccaccagtgcagtgcttacatcgattgctccatttactggacgtaagaccactgct
gtgcatgcaaccgactccgtgacaggccaaattctgcgatgtgaggtttttattgataag
atatcgcgaattcaaattttccatcattcgctcaagctggatttggacggattagccaca
ctgcgcattcgagcttttgatactgaagacaatgtattttctgcgttggcgggcttgcag
ttcatgtggcaactttcaccgctgagtcagacaggtgacacgtcccaccggcttttgcac
gtccctcttaagcatacatctcttattgatggcgagatcgaggatcaaattgaattggag
cagaatgggcttggatcggatttgtatgtggttcgaggtgttggagcaggccaagaaaag
gttactgcacattttgtggagccaggctttgagaacttatcacatatcattactcttact
gtggcggaagctgtttcattgggccctccttccccagtattcatgattccaggcactcga
cttcagttcactctacgagcactgcggcgcaatgaggtcaaagttatttcattgccatct
ccacatcatcggtggtcattagacaactctactgttgcagatattgacactgtatcaggt
ttcataacagcgcgtacatatgggtccacagtggtgacggtggaggacttgaggttatca
gggcatcaacaaacatcaactatccacgttgtccgtccaataagcctagtgttatcccta
tctcctcttttggggaaggagacaggtgcagtgtccaacgtaaagcagtcagtggttctg
tctgatagcaattggcaagttgtggcagggcgcaagtacgtggttcaggcatttgctttc
tcgaaggaatccggaaagaaacctcttttattgacaaaagataatgacttaactatgcct
cgtgctatttctcctttctggaggatgtccaaggttcctgaagctgtggtagctgaacaa
ggatggcgtaattgctctcttctggaagcattgtcagaaggaaatggcagattagtagca
agtcttggccatggtgtcatggtccacgaccctttaagtggcagctggttggaaaggaat
aaagagcttctcactactgaagaggaattaactgtatgcgcacaagtaaaaatattacgg
aatcattttggagaatatttgggtctaccctgggcacctggttatgagcaattacatcat
ctatctgctgaaggaggctgtgggacgaagccaacggattatcagtggtcatcctcaaat
cctgccgtggccacagtaaatgttgatggggttgtgcggaccaaaggcttaggaagagca
gtaattcatgctacagccctgggcgatgttttgaatgatgacgagatcattgtggaagta
tcataccctactgccattggtattgcacctggtttacccgtagaggtagaagttggatcc
tatattcctgtagctgttggtctgcgggattcttctggcatggaatatgctagctgtgat
gtcttgaagaatgctgttcagtgggccatatttggtggcgatggacaattttccatggtg
agtgaagatgcccaaatgttaagctcagcgcaagaaaaggcgattcaattgattcacccc
cgcgtctgtgcatgggccttaatttccgcaacccgaactggcagagcaacagtaagagct
tccctgaatattggggaactgctagtagggtttacctcatctgagattgaacatcctttt
ctggaagcctcatggcctattgctgcctttgctcctctcactttggagcaggcaaagagc
ggggatgggcacgggggctactcacataagttggcgggcaccagacttgttccactgcct
tcacctgaatcccggcatctaaaagagctattattggtactaagaagcagcatgaaagtg
ttcttgtgtggcggccctgaacggtggcgccaaggagttgagttcgtagatacccatgaa
gttataaatgaacaaggcgcagcgggcaaagagaacattggagtgtctcatgtgcaggat
ggaggaaattgggtttacaacattgaatgcaagagtttggggaattctacaatatttttt
taccgtggaaatctcgtgggcgaggaccacccaactaaaagcgtagttagtgtgtccctt
tcagtgacatgctcagttccatcagctatcacccttctcattgatgaaccagagaacagt
atgacctcaattaagttggcagcacacgctgagcgggataaaacaaactgccaaattgca
cctgttacggtgatcaatgatcgatcaatcagggttgccgttgttgctttagatgacgcg
agaaggccattttcgaatgcttcatctttgagtgtatcgtggaagcttgtggggtgcaaa
aatcttgcccaatgggtcgtggaggaatccaactcaaacgtggtttctaatggttgggag
cgtaagcttgcacttggaaatgctgcaggagagtgcactgtacgcgcagatttgcacgga
tttgctagtgaatacgagggtgcatttgctatgattcctgcatggaaatcttttgcaaaa
tcatttggacacctcagtgatgcagttcaactacagcttgtggcagctttacggattgag
cctagtaattttcttcttttccaccatccagattccaaggcaagcttgtcaatattgggc
ggaacaaatgaagttgaggcccgtgctaatgactctcgagttgtggatgtggttcttctt
gatactcgaggcctgattgtggctgcccgaggattagggagtgctcttatcaccatacgg
gatgtaggtttagcaactccagcatctgcgagcgctctggtgaccgtgtcagatgcggca
gcagttagaatgttacttcctgaggatacgagtctgcaggtgggttcatgccttgtggtg
aaggtggaagcagcagatagttctgggcgtgtttttgactcttctcagtttatatttatg
aacctgagagttcatcttcaagatggagttctgattaccaagcctcatacgagtgctcat
cttgcagcgaatgagttcgtcgtttgtggggccaatgtgggccttactacaacacttcat
gttagcattcgacaaagatccgacaaagaggtcttttctgatgttgcgcggattttggtt
tacgctcctctttctatccgtccatctgctctggtgcttgcacccggagcaaagtattta
ttggtggtggatggaggtcctcagacaggtgtcgtatttaatttcgatgctactcatccc
gaggtagtgaaaattgatcctgcttctgggcttcttgaggccaaagctccaggaagagcg
accgtacaagctcaggcacgcaatcataatggggagctccttagtgaagctcagttgaac
gtgacggtgcaagttccagtttcaatgatacttgatgtgaggggaggccagcttgctatt
ggccgtgaaattactatatttcctcatgggtttggggagaacctgtttgccttctatgat
ttatgcggtaactacaaatggtctgtcggaaatgatcaggttctaggtctggcaggcata
gatgatttttctggagaggaaaagaattccgctttatctgaggtcgccagttctagaaca
aaaggctgggggaagctggacgagtcttctggtactccatatgggttcactgctagagcc
attggcaaatctgcaggaaggacgactgttactttgtctttcaactgccaatttcactac
aacgggcagaaagtggagaaagagttcaagccgtctggcacagtgtgggtagtaccagat
ccgcctttatctctaggtataggagccacatgggtgctgcctccatcttacagcagctct
cctctgttactccaaagggaaaggccagtccccgaattttcggatccaggacgaggtgga
ggcagtgtcacttactcagtcatgcatcaaagtatcaacgatgccaatgtaataaccctc
atggaaagtggaacaatacaaacttcagagaagacagaagtggcatgtattcatgccaga
gatcgtagcaccgggcggtctgaagttgctgcatgcgtgcgtgtggctgaggttttctcc
ctcacggtaggagatgatatacttgcagttcctctggcagaactatctgtaggtacagat
caaaaattggcagtgaccctacgcgatgatcttggagttccgtttttggaagctggaaca
acaataccaataactcttgataccaatcgtgccgacctgataactgtcaaagtggtcgac
gttgagattgttggtcgatcaagcaaggccaccattcttgtaaaggctgtaaggcaaggc
tcagctttggtgcgtgtaacatataaaaataatccgcaaattgtggattggataatgatc
aacgtaggggcgtatgtatatccgcgtagcccagtcctacacattggaaatcgtctaagc
ttctctatcctcggtaaagggctacatggactgcttacaggtgaacgtggaagctggtac
agttccaatgcaagtgttgtacgagttgatagccatagtggagaagctcaagctattgca
gagggcgtagcaactgttagctttaacggaacgcggttgacaacatacacaacggtcaat
gttgtcagagttgcttctgtacacatcgaggtgcccactggcatcatttccaatgtgcct
actgcacgagagggctactattttcctgtcaagttcagtgatgcgtatggtcgtgatatt
ggaatagtgggtgagaatcgggaggtgtcatacagctgccaagttcagccgagtttcatc
ggggaagccaaggcgtggcgagagcctggtagtggtgctttccactgtgttttcctacca
aatcagccggccaaattgaaggaagcgtatcagaagtcggttgcccagaagcatatagct
cccaagtatctcaatggaaaattagagttttctatgatagttcaggttgagggaacatca
ggtatcgaagggtccgtaaaggcctggttcgctggaggctttgagattgttcagagcatg
ccttctcagctcacgcttacatcaaaatcaaaagaatgggaatttgtagtagttggttgt
gtacatccagatattgttcgacctacaatacccggacaacctgaagccttcagtattaag
cttcagaaccctaaagttgaaactgatggagccggcgggcgtgcattatacaagttgaaa
gttgtggacgagagtaagcctataagtgactctttggtcatcagatcgtctctgacaggt
caagagctagaactgccagtatgcttcaagcctggaaaatcgactatagctggtttgaca
gcacagatcgcgacaactgtggtcatcatcgtactgctgatgattcttcctctagtcttc
tgtgcccgcttgctcgatgtacagcgatcgtcattagcctccaggaatgtagacactctc
ccatcagaacctgctgctaatggtggtcagtacgagaccactcctctccgtcaacggata
gtcggctctcctcgaactccacagactcctccatccgggggattgggatacagaagtcct
caacaaccttacacggagtatgtgagcagaaccttagagaacacgccctattacagtcga
gaaggcatacgaaagtatgacccctcgttcacatactga
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