Physcomitrium patens (spreading earthmoss): 112280163
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Entry
112280163 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112280163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppp04121
]
112280163
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112280163
Ubiquitin system [BR:
ppp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112280163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
zf-C3HC4_3
MATH
zf-RING_2
TRAF-mep_MATH
Motif
Other DBs
NCBI-GeneID:
112280163
NCBI-ProteinID:
XP_024371076
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Position
3:complement(12926195..12933119)
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AA seq
959 aa
AA seq
DB search
MDAATIRRGSGGSRSSSSSHSSTCNPLVPGPIITVSPTRAPDYDCTDCGSFFFGSRGRHR
PRSHGAWSSSSHHHSRGNIISEPVQRLFLVGSTPVHHPATSAVSQQVFLPQNEQLHEISQ
ATELQDIVDLTNATGPSVDVREPVSLEASDNEKVGNQRAVDFVSCHGATSTFAGNVNDSS
STLAEIFRCFICLGKVVDAQLCPCCSKLVCQSCIKRWLTDQKSECPHCRAPLLLSQLVSC
RFISEISSEVEKIQGNLGDSSIEKQYCPAHDSPFLYFCTTCSVPVCPDCAVLIEDHRNHT
FEKLSVAYGRHKKKIRMEAAGLRKRQKELSALVVSVEKNIDTVLKAKDESAAELQMAFKR
MQSRLEEQLKCKLLALLAQKGSMTQEMELLDTILHELDQQLNSIPKSDLIAQEPNMSRML
QDIRTRTLSHISCTPIPPEFTSEVVPSYEHGELILKKYKETITLPRSSVFSPGGTPSSSE
ALSSKDVVYSEPIRGSGITWRLKVYPNGSGASLGTHLSVFLEMVDGGNEAVTYEYGIELL
HQTRPNQRIVRKFSSDYEVGACWGYYQFFRIDLLEKEGYLQPDEDTITLRFYVRPLTFQQ
QCQDLRRSLAALQVERDESATQVTVIRRAFATALFQRRRRRSNRTVGQVANEKVALAQAV
ATGTGTTIASNTLALRKELQVSSIKDLPRTMQDSSGTRAGKSWNLGMLPQCEDRCNSECT
IVIHSEDISQAVAADSPVRPNESSLTQHDGPLGEGHFSELMTHPKRGDIPATTTKHDDDN
VRALPMEPTATRKPKDINYQELWTKRGEESFQTPKVRSHKKIRSRKALKVLRAPEALPPF
TDLSDTGGLDQQLASVSLERSPSTKKTANPAAPGNGHESSRNEMCEDGADSHQVVQNEST
GPTVVSAIDRALIDEGMEEKKYLYYTSMSGSSNFCTPDIEDCSNFKQATEDGTDTSIHH
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggctaccattcgacgaggaagcggtggaagcagaagctccagctccagccac
agcagtacttgcaatcccctggtccctggccctatcatcacagtgtcaccaacccgcgct
ccggactacgattgcacagattgcggttcttttttttttggcagccgggggaggcaccgg
cctcgatcccatggcgcctggagcagcagcagccatcaccactcgcgaggaaacatcatc
agtgaacccgtccagaggctcttcttggttggatccacgcccgtgcatcaccccgccact
tctgcggtatcacagcaagtgtttctgccccaaaacgagcagctacatgaaatttcccag
gcgacagagcttcaggacattgtcgaccttacaaacgcaacaggtccatcggttgatgtc
agggaaccggtttctttagaggcctccgacaatgagaaagtgggaaaccaaagagcggta
gattttgtatcttgtcatggtgccacatccacatttgctggcaacgtcaatgactcatcg
tcgacattggcagaaatttttcggtgcttcatctgtcttggaaaggttgtggatgcccag
ctgtgtccatgttgttccaagctggtgtgccagtcgtgtatcaagagatggctcacagat
caaaagtcagagtgcccacactgccgtgcgcccctccttctatcgcaactcgtgagctgt
cgatttatctctgagatttcctcggaagttgagaagattcaagggaatttaggtgacagt
tcaatagaaaagcagtactgtccggcccatgacagcccctttctctacttctgcacgaca
tgctcagtccccgtatgcccagactgtgcggtcctgattgaggatcatcgaaatcacacg
tttgagaagctgagtgttgcctatgggcgtcacaagaagaaaattcgcatggaagctgcc
gggctacgcaagcgccagaaggaactctccgctctcgtggtttcagttgaaaaaaacatc
gacactgtgcttaaggcaaaggacgaatctgctgcagagcttcaaatggcttttaaaagg
atgcagtctcgacttgaagagcagctcaaatgtaaactactggcattactcgcacaaaag
ggttctatgactcaagaaatggagcttctggacacaatattgcacgagttagatcaacag
ctgaacagtattccaaagagtgacctcatagcgcaagaacctaacatgagccgcatgctg
caggacatccgaacgcgcactttgtcgcatatatcgtgcacacctattcctcctgaattt
acgtcagaggttgttccctcgtacgagcatggagaactcattttgaagaaatacaaggaa
actatcaccctacccagatcttctgttttctctcctggtggcactccgagttccagtgaa
gccttgtcgagcaaagatgttgtgtacagtgagcccatccgtggttcaggtattacgtgg
agactgaaggtgtacccaaatggcagcggcgcttctttgggtactcatctctctgtcttt
ctggagatggtagatggcggaaatgaagcggtaacttacgagtatggtatagagctcctt
caccagactcgtccaaaccagcgcatcgttcgcaagttctcttccgactatgaggtgggt
gcgtgttggggttactaccagttcttcaggatcgatcttctggagaaggaaggctacctc
caaccagatgaggataccatcactttgcgcttctacgtgcgccctctcacatttcaacag
caatgccaggacttgcggagatcacttgccgctttgcaagttgagcgtgacgagtcagcc
acgcaggtgacagtgattcgaagggcgttcgcaacagcattattccagcgtaggcgcagg
cgaagcaaccggaccgttgggcaggttgcaaacgagaaagtggccttagcgcaagctgtt
gcaaccggaacgggcaccaccatcgcctcaaatacgcttgcgttgcgtaaagagcttcaa
gtttcaagcatcaaggatttgccaaggacaatgcaggattccagtggtaccagagctggc
aagtcatggaacctggggatgttgcctcaatgtgaggatcgttgtaattctgaatgcacc
attgtgatccactctgaagatatttctcaagctgtcgctgcagattctccagttcgaccg
aacgaatctagtctcactcaacacgatggtcctttaggtgagggacatttttcagagtta
atgacgcatccaaagcgtggtgacatccctgcaacaacaacaaagcacgatgatgataac
gtaagagcgctacccatggagccaactgctacccgaaaacccaaagacataaattatcaa
gagctgtggacgaagaggggagaggagtcttttcagacacctaaagttcgttcccacaag
aagattcgaagccggaaagccctcaaggtgcttcgtgctcccgaagccctgccgcccttc
acagatctgtcagataccggtggacttgatcagcaactcgccagcgtctctttggagagg
agcccctcgactaaaaagactgcaaaccctgctgctcctggaaacggtcatgaaagttca
agaaatgagatgtgcgaggatggtgcagattctcatcaagtagtccagaacgagtcgact
gggccaactgttgtcagtgccattgatagagctctaatcgatgaggggatggaagagaaa
aaatatctctactatacctcaatgtccggctctagtaacttctgcaccccggatatcgaa
gactgcagcaacttcaagcaagcaacggaagatggaaccgacacgagtatacatcactaa
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