Physcomitrium patens (spreading earthmoss): 112280202
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Entry
112280202 CDS
T01041
Name
(RefSeq) uncharacterized protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112280202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112280202
03041 Spliceosome [BR:
ppp03041
]
112280202
03032 DNA replication proteins [BR:
ppp03032
]
112280202
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112280202
Spliceosome [BR:
ppp03041
]
Complex A
U1 snRNP components
Sm proteins
112280202
U2 snRNP components
112280202
Complex B
U1 snRNP components
112280202
U4/U6.U5 tri-snRNP components
112280202
Complex C
U2 snRNP components
112280202
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112280202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
112280202
NCBI-ProteinID:
XP_024371180
UniProt:
A0A2K1KVY0
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All DBs
Position
3:17097409..17099324
Genome browser
AA seq
307 aa
AA seq
DB search
MSISKTSKLLLYINWRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEELRRVPPKKGKTQE
EREERRTLGLLLLRGEEVISMTVEGPPPPDESRAKAAAAAAGGPGVGRAAGRGIPTAPLN
QAQPGLAGPARGVGGPAPGMMQPRPQVSAAPVTYTPPPGPMPGVRPLGPPPPGQFAPRPM
PGPPGAPPPGMRPPGQMMQGPPGQGPPQGYGQGPPGGRPMPPPPGPPPQMSGPGMAGPYG
QRPMGPPPMMRGPPPGMGGPGGPPRPGMPPGMQGPPRPGMPPPPGAPPGMYGPRPGMPPP
QQQPPPQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatccaagacgtccaagttgttactgtacataaactggcgtatgcgggtgacg
atacaggacgggcggcagctggttggcaagttcatggcattcgatcgccacatgaacttg
gtgctgggtgattgcgaggagctgcgacgcgtgccgccgaagaaggggaaaactcaggag
gagagggaagagaggaggacgttggggctgctgcttttgcgcggggaggaggtgatttcg
atgacggtggaggggcccccgccaccggacgagtccagggcgaaagcagccgcagctgcc
gcgggaggtcccggggtggggcgtgccgcagggcgtggaatcccgactgcacctttgaac
caggctcagccagggctggcagggcctgcgagaggagtgggcgggcctgccccggggatg
atgcagccgcgacctcaggtttcggcagctcccgtgacttacacacccccgcccggtccg
atgccgggagtgagacctctcgggcctccacccccagggcaattcgctccccgcccaatg
ccggggccgccaggcgcacctcctccagggatgcggcctccggggcagatgatgcaaggg
ccccccggacaagggcctcctcaaggctacgggcaaggtcctcctggaggaagaccaatg
ccgcctcctcccggacctcctccgcagatgtctggaccagggatggcaggtccgtatgga
cagcggccgatgggtcctcctccgatgatgcgcgggcctccgccagggatgggagggccc
gggggtcctccacgacctggaatgccccccggcatgcagggacctccaagacccgggatg
cctcctcctcccggtgcacccccggggatgtatgggccgcggcctgggatgcctcctcct
cagcaacagccgccgccgcagtga
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