Physcomitrium patens (spreading earthmoss): 112288248
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Entry
112288248 CDS
T01041
Name
(RefSeq) cytidine deaminase 1
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00240
Pyrimidine metabolism
ppp01100
Metabolic pathways
ppp01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
112288248
Enzymes [BR:
ppp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
112288248
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Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_2
dCMP_cyt_deam_1
OTT_1508_deam
APOBEC_N
Motif
Other DBs
NCBI-GeneID:
112288248
NCBI-ProteinID:
XP_024388022
UniProt:
A0A2K1JTJ1
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Position
11:complement(3357238..3359430)
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AA seq
325 aa
AA seq
DB search
MQEFVIDVAKAGKLRHASRLGVEPFLASLAKPTADLARAPISKFQVGAVGLGVSGRIFLG
VNLEFPKLPLNHSVHAEQFLVANALQHGEKRLVFIAVSAAPCGHCRQFLQELRDAGDIRL
LITDGKDPQVRPLSYFLPHRFGPDDLMSRNFPLLLESRSNDLILVNSAMSEINFDISREE
TNEDLAEKDSKKRDLLKEASFGAWLRDNKHSLVDLKLAAFAAANASYAPYSRCPSGASLV
TRKGQVYSGSYIESAAYNPGLPALQAAIVAFICGGGGAYDEIDTVIIVERKGALVRHAPT
ARLALQSIAPQAAFHHFEVDVQSRE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaatttgttatagacgttgctaaagcaggaaagctgcggcacgcgtcgcggtta
ggagtagaaccattccttgctagcctcgcgaagccgactgcagatttggcccgcgcaccg
atttctaaatttcaagttggagctgtgggtctcggggttagcggtcgcatctttttgggc
gtgaacttggagtttccgaagcttcctttgaaccattctgtgcacgccgagcagtttctc
gtcgcaaatgcactgcaacatggcgagaaaaggctcgtgttcatcgctgtctccgctgcc
ccgtgtgggcattgcaggcaatttcttcaggagttaagagatgcaggggatatccgattg
ttgatcacagatggaaaggatccccaagtgcgtccactttcgtacttcctcccacacaga
tttggtccagacgatttaatgtccagaaacttccccctcctccttgagtcgagaagtaat
gatcttatcttagtaaattctgcaatgagtgaaattaattttgacatttcccgcgaggaa
accaacgaagatttggcagagaaggactccaagaagcgtgacttgttaaaagaggctagt
tttggtgcgtggttgcgcgataacaagcactcacttgtagatcttaaacttgcggcattc
gctgcggccaatgcctcgtacgcgccttacagcaggtgtccctccggagcgtctcttgta
acgaggaaaggccaagtctacagcggctcctatattgaatcagctgcttataacccagga
ctccctgctctacaggcagcaattgtagcattcatttgtggaggaggcggagcttacgac
gaaatcgataccgtcattatcgtggagagaaaaggcgcacttgtgcgacacgcacctaca
gcccgtctcgccctccagagcatcgccccgcaggcagccttccatcacttcgaagttgat
gtacaaagtagagagtaa
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