Physcomitrium patens (spreading earthmoss): 112288918
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Entry
112288918 CDS
T01041
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00906
Carotenoid biosynthesis
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112288918
Enzymes [BR:
ppp01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
112288918
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
FAD_oxidored
GIDA
Pyr_redox_3
NAD_binding_8
DUF2399
FAD_binding_3
Motif
Other DBs
NCBI-GeneID:
112288918
NCBI-ProteinID:
XP_024389432
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Position
11:9666373..9671141
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AA seq
589 aa
AA seq
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MNARLAHDPHFSRLHVMGAAVAGALPHLHCAAAGSTSTSSSSFFVPDIVRSSSAAFASCA
ARPGRHWPLRRGNDVTASRSLSWTVPAGRVGKQCAKCPTVCFAASVPTQIHDVVSEDEED
YIKAGGEELDLVQLQASKSCEQPKIAEKLQPLGSETLDLVVVGCGPAGMCLAAEAAKQGL
NVGLVGPDLPFVNNYGVWTDEFAALDLEDCIEQTWRDSAMYIEEHSPIMIGRAYGRVSRT
LLREELSRRCAEAGVRYLDSKVDRILEVNEDLNTVVCTSGRTVNSRLVTVASGAAAGRFL
KYETGGPGVGVQTAYGIEVEVEHYPYNPDFMLFMDYRDYRSRDKGDISPEEIPTFLYAMP
ISSTRVFFEETCLAARPAMPFSLLRERLQERLEKMGIKVSHVHEEEWSYIPVGGSLPVTT
QRQLGFGAAASMVHPATGYSLVRSLSEAPFYAAAIARALKSTGGKLGTSNSQEAAIEAWN
VLWSGERKRQRAFFLFGLELILQLDTVGIKDFFVTFFRLPEWLWKGFLGSKLSSVDLIWF
ALATFVIAPNALRFQLVKHLIVHPSGAKLVQTYVGLVDAGTHSTKLTRV
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaggcttgcccatgacccgcacttttcccgtctgcacgtgatgggagctgca
gttgcaggcgctctaccgcatcttcattgcgctgctgctggttctacttctacttcttct
tcgtcgttttttgtacctgatattgtgaggagttcctctgcggcttttgcttcctgtgct
gcgcggcccggtcgccattggccgctgcgtagaggaaatgatgtaactgcgagtcgtagc
ctcagctggacggttccggcggggcgagtcgggaagcaatgtgcgaagtgtccgacagtg
tgcttcgctgcttctgttcctactcaaattcacgatgtagtgtctgaggatgaggaggat
tacatcaaggctggcggagaagagctggacctcgtgcagctgcaggcctccaagtcttgt
gagcagccgaagattgccgagaagctacaacctttggggagcgagacattggatttggtg
gttgtaggctgcggacctgcgggaatgtgcctcgcggctgaggctgccaaacaaggcctg
aatgtaggtcttgttggtcctgacctgcccttcgtcaacaactatggtgtctggactgat
gaatttgcggcgttggatctcgaggactgcatagagcaaacttggagagactcagccatg
tatattgaagagcactcgccaattatgatagggcgtgcatatggtcgcgtaagtcggact
cttctgagagaagagctctcgagaaggtgcgctgaggcaggagtaagatacttagattct
aaagttgaccggatacttgaagtcaacgaagatttgaatacagtcgtgtgcaccagtggg
agaactgtcaacagcagacttgttacagtcgcgtctggagcagctgctggcaggttcttg
aaatatgaaacaggaggtccaggagtcggtgtgcaaactgcttacggaattgaagtggag
gttgaacattatccttacaatcctgattttatgctcttcatggactatcgagactataga
agtcgagacaaaggagatatcagccctgaagagatacccacctttttgtacgcaatgcct
atttcatcaactcgtgttttcttcgaggaaacatgtcttgctgcaagaccagccatgccc
tttagtctccttagggaaaggctacaagagcgtttggagaagatgggcattaaggtttca
catgttcacgaagaggagtggtcatatatcccagtgggaggcagcctaccagtgacaact
caaagacagctgggttttggagcagctgccagtatggttcacccggccactggctattca
ctagtccgctccctatctgaagctccattttatgcggcagccattgctagggcacttaaa
tccacaggcggcaagcttggcacatctaattctcaggaagctgctatagaagcatggaat
gtcttgtggtctggcgaaagaaagagacagcgagccttttttctgtttggattagagctt
attttgcaacttgatactgttggaatcaaagattttttcgtgaccttttttcggcttcct
gaatggttgtggaaaggttttcttggctcaaagctttcatccgtggatcttatctggttt
gcacttgcaacttttgtgattgctccaaatgcgttgcgattccagcttgtgaagcacttg
atagtacaccccagtggagcgaagttagtgcagacgtatgtgggtcttgtagatgctggc
actcattccactaaattgacgcgcgtgtag
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