KEGG   Physcomitrium patens (spreading earthmoss): 112288983
Entry
112288983         CDS       T01041                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03420  Nucleotide excision repair
ppp04120  Ubiquitin mediated proteolysis
ppp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112288983
   04120 Ubiquitin mediated proteolysis
    112288983
  09124 Replication and repair
   03420 Nucleotide excision repair
    112288983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppp04121]
    112288983
   03400 DNA repair and recombination proteins [BR:ppp03400]
    112288983
Enzymes [BR:ppp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     112288983
Ubiquitin system [BR:ppp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   112288983
  Multi subunit type E3
   SCF complex
    Ring finger protein
     112288983
   Cul2 complex
     112288983
   Cul3 complex
     112288983
   Cul4 complex
     112288983
   Cul7 complex
     112288983
   Cul8 complex
     112288983
   Cul9 complex
     112288983
DNA repair and recombination proteins [BR:ppp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      112288983
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      112288983
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 112288983
NCBI-ProteinID: XP_024389571
LinkDB
Position
11:complement(12639979..12641223)
AA seq 120 aa
MAAIDTEMATGPTGEGSSAGVSSSSAVSKRPKRFEIKKWNAVALWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGR
NT seq 363 nt   +upstreamnt  +downstreamnt
atggcagcgattgacacggaaatggcgacggggccgaccggggagggctctagcgccggg
gtgagctcctccagtgctgtttccaagcgcccgaagcggttcgagattaagaagtggaat
gctgtggctctttgggcgtgggacattgtggtggacaattgtgctatctgccgtaaccat
atcatggacttgtgtattgagtgccaagcgaaccaagctagtgcgacgagtgaggagtgt
actgtggcatggggtgtttgcaatcacgccttccatttccattgcatcagcagatggttg
aagacgcgacaagtttgtccattagataacagcgaatgggaattccagaagtatggacga
taa

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