KEGG   Physcomitrium patens (spreading earthmoss): 112294415
Entry
112294415         CDS       T01041                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RKP
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppp04121]
    112294415
Enzymes [BR:ppp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112294415
Ubiquitin system [BR:ppp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112294415
  Multi subunit type E3
   KPC complex
    112294415
SSDB
Motif
Pfam: TPR_RNF123 SPRY RKP_N zf-C3HC4_3 Ufd2P_core zf-RING_2 zf-C3HC4 zf-C3HC4_2
Other DBs
NCBI-GeneID: 112294415
NCBI-ProteinID: XP_024400550
LinkDB
Position
17:complement(10043554..10052849)
AA seq 1364 aa
MWADGGLRKGRQFQRTRSTGLAALLDEKEIDAGVIVASCMHDECSKWGLDRTLAHVFGVS
PGLELSLLDHDRIDASSVRSYLYSQLSIVRQADDYSTSDRDHKKSVFINDSPFGNGIVAM
DSASACGDIKFDKRFLQLESHSVFISARANACVWRGRWMYEATLGTAGIQQLGWATISCP
FTNEEGVGDAADSYAYDGKRVRKWNECHATYGQPWVAGDVIGCCLDLEKKEIIFYRNGIS
LGVAYDKIRAVDPKDGYYPAISLSHGERCELNFGGRPFMYPVEGFSPIQLPPTVEVGDME
NEMNSVCDRAKFLLGCLQRLVRLGSGEVAAAMAPEDRLKRYTPLTDHDVLLIGAEICDFL
RPLLLRSSSLGKDEKSNLPEDYTVWGALVPFLLETYRSEAPHDAPSVDLALDLLLPGLER
DACGSSFVSTIMEALAYGCRTSPFVLADHPYTGPYPYLALACHLLERYDFMVSWWMSEGF
DLCLEGLLTRKGPNKNDLEGLMPIVWWPGSREDLCSEGKMRHAATALSRAIVKIEDLQWE
LCGRLLHFVPPPTEELAQPLPGVVFRRFLRNLICKNRGAYRSIAPAGLSDNSVLVSTHCV
LLRLLSEGFGPGKVIGDTNEGMKDHDNSKGFLHRVGKRTFPASIFLKDSDFARLGGTFSH
LVKTFSGGLDVLEVEWEESCMDEEDDIVRHGGKLKPACCSDLALSELLGPSKSLVRVPSK
IVAVSTSAGVGERISSPISSTYTSGRSCDECVEDKPSSSGRVYISSGGAPASRSYRKSGF
RSVKELSEAIREEELLDIMLVFYHLGLAQIFRQASFFMQHQMQSIAQLDETDRQIRGEKM
SCEYLKRLKEARTVYREDLIDCVRQCTWYRVTMFARWKLRGMYATCIWVAQLLLVLSKKD
SIFSFVPEFYVETLVDSFHVLRRSDPPFVTPSSLLQQGLSPLVTFLVTHFSDARIANSDV
RDILLQSISVLVQHKEHVIAFERSQAARAGMVGSLLASFDNRFWIPVSNILLRLCKGSGF
GASKCLSHGKPFSPHFQRLLKEKCMSDEKLFASFLNRLFNTLNWTITEFSVAIKEMQEHS
DLRQVPDLLQRKCIVMFELSCNLERILEFFTQELPHAFLQGPEINLVRLCELIIFVLNHT
TSCADAHFFDSTVRQQGQSLERVNRAMILAPLVGIVLNLRSTTSLPSPVIAHDMATVLAA
ADISTALIGNFQYLMNYSWEVTFKGDPSIKRISDLKFFISKLKDEIEKVRRQASVDSFLS
SNPSSDPLGNLAIMDREETCTICYACEVDTVFLPCKHKSCQRCISRHLLNNQRCFFCNSN
VIKVSSMCAVENDECPADLSRTLTGTLADAKLPQPSTGPPPTIQ
NT seq 4095 nt   +upstreamnt  +downstreamnt
atgtgggcggatggaggtctgcggaaagggcgccagtttcaacgaaccagatctactggt
ttggctgccctcctggatgaaaaagagattgacgctggggttattgttgcgtcttgtatg
catgatgagtgtagcaaatgggggctggaccgtactctggcacacgtttttggtgtgtca
cctgggttggagctctctttgttagatcatgacaggattgatgcaagtagtgtgcgatcg
tacctgtattcacaactcagtatcgttcgacaagcagatgactattccacgtctgatcgt
gatcataagaagagcgttttcattaacgactccccttttggaaatggtattgttgctatg
gatagcgcctctgcttgtggagacatcaagtttgataagagatttttgcaattggagagc
cattccgtttttatcagcgctcgtgccaatgcatgtgtttggaggggtcggtggatgtat
gaagctactcttgggacagcaggcattcagcaacttggctgggctaccatctcatgtcct
ttcacgaacgaggaaggcgtaggtgatgcagcagattcgtatgcgtatgacgggaagaga
gtccgtaagtggaatgaatgtcatgcaacttatggtcagccttgggtagcaggggatgtt
attggttgctgtttggacttggagaaaaaagaaataattttttacaggaatggtatttct
ttaggtgtagcttatgacaaaatcagagcggttgatcccaaagatggttactacccagca
atctcattgtcacatggcgagcgctgcgaattgaattttggtgggaggccattcatgtat
cctgttgagggattctctcctattcagctgcctccaacagttgaagtcggcgacatggag
aatgagatgaattcagtgtgtgacagagcaaaatttttgcttggttgtttgcagaggctt
gtgcgattgggaagtggagaggttgcggcagccatggcacctgaggacaggctgaagaga
tacactcccctaacagaccatgatgttttattaataggtgcggaaatctgcgattttctt
agaccgctgcttctacggagttcaagtctcggtaaagatgagaaatcaaatctaccagaa
gattatacagtttggggtgcacttgttccgttcctgctggagacctacagatcagaagcc
ccccatgatgcccctagtgttgatctggcactggatcttttgctcccaggattagaaagg
gatgcttgtggtagctcttttgtctccactattatggaagctcttgcctatggctgccgc
acatctccgtttgtgttggctgaccatccttacacgggtccctatccatacctggcctta
gcttgtcatctgctggaacgatacgattttatggtctcatggtggatgtcagaaggattc
gatttatgtctggagggactgcttactcggaagggtccaaacaagaatgatcttgaaggg
ttgatgccaatagtatggtggcctggatctcgagaggacctctgttcagagggtaaaatg
aggcatgcggcaacagcattgtctagagcaattgtcaagatagaagatttgcaatgggag
ctctgcggtcgacttcttcactttgtaccgcctccgactgaagagttagcccagcctctc
cctggtgtggtttttcggaggtttttacgcaacctcatatgcaaaaatcgcggggcttac
aggagtattgcgccagcagggctgtctgataattctgtgctagtttcgacacactgtgtt
ttgctgcgacttctgtctgagggcttcggaccaggcaaggtgattggtgataccaacgag
ggaatgaaggaccatgataattctaagggctttcttcatagggttggcaagcgtactttt
cccgcgagcatcttcttgaaggactctgatttcgctcgtttagggggaaccttcagtcat
ttggtgaaaaccttttctggggggttggatgttctggaagtggaatgggaggaaagctgc
atggatgaagaggacgacatcgtacgacatggagggaaacttaagccagcttgttgttca
gatcttgccttaagtgagttgctgggccctagcaagagtcttgtgagggttcctagtaag
atagttgctgttagtacatcagctggagtgggtgaaaggatcagtagtcctatcagtagt
acttacactagtggccggagttgtgacgagtgtgttgaggataagccaagttcaagtgga
agggtgtacatcagctcgggaggggctcctgcatctcgcagttacagaaagtcagggttt
agatctgtcaaggaactatctgaggctattagagaagaggagttgcttgatattatgctc
gtcttctaccacctcgggcttgctcaaatttttagacaggcctcgttcttcatgcagcat
caaatgcaatctatcgcacagctcgatgaaaccgatcgtcagatacgtggagaaaagatg
tcttgtgaatatttgaagcggttgaaggaagccagaacagtgtatagagaagatttgatt
gattgtgtacggcagtgcacgtggtaccgagtgacaatgttcgcaagatggaagctcagg
ggaatgtatgctacatgtatctgggttgcgcagctattgttggtcctgagcaagaaagat
tctatttttagcttcgttccagagttctatgtggagactttggtagactcttttcatgtt
ttgcgaaggagtgaccctccatttgtgacgccttcttctctcctacaacaaggcctttcg
cctctggtgacttttttggttacccatttcagtgatgcccgcatagcaaattcagatgtg
cgagatattttgttgcaatcaatttcagtgttggtgcaacataaggaacacgtcattgca
tttgagcggagccaagcagcccgtgcaggcatggttggctctcttttagcttcttttgac
aaccgcttctggattcctgtatccaacatcttgttgcggctctgcaagggttctggattt
ggagcttcaaaatgtttatcacatgggaaaccattctctccccacttccagcgtttacta
aaagaaaaatgcatgagcgatgaaaagctttttgcatcgtttcttaaccgcctcttcaac
acactgaattggaccataacagagttttctgtcgcaatcaaagagatgcaagaacactcc
gacctacgtcaggtaccagatttgctgcaacggaaatgcatagtaatgttcgagctttct
tgcaatttagaaaggatactcgaatttttcacacaggagttgccgcatgccttcttacaa
gggcctgaaatcaatctcgttcggctttgtgagctcattatattcgttctcaaccacact
acatcatgtgcagatgcccatttttttgacagcactgtcaggcagcaagggcaatcttta
gaaagggtcaacagggcaatgatcttggctcctctcgttggcattgtgctcaatttgaga
agtactacctcattaccaagtccagttatagcgcacgacatggcaactgtccttgctgct
gcagacatttcaacagctctgattggcaatttccagtatctgatgaactatagctgggag
gtgacattcaaaggtgatccttcaataaaaaggatatcagatttgaaattttttatatcg
aaacttaaggatgaaatagagaaagttcgtcgacaagcttctgtcgattcttttctttca
tcgaacccatcttcagatcctctggggaaccttgcaattatggatagggaagaaacttgc
actatttgctatgcttgcgaagtggacaccgttttcttgccctgcaaacacaagtcatgc
caacgttgtatatctcgtcatctcctaaacaatcaacgatgttttttctgcaattccaat
gtcattaaagtttcttcaatgtgtgctgtggaaaatgacgagtgcccagcagatctaagc
aggactttaactggcactttagcagatgccaagttacctcaacctagcacagggccacca
ccaacgatacaatag

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