Physcomitrium patens (spreading earthmoss): 112294434
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Entry
112294434 CDS
T01041
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04075
Plant hormone signal transduction
ppp04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112294434
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112294434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppp03000
]
112294434
Transcription factors [BR:
ppp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112294434
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
SpoIIIAH
Motif
Other DBs
NCBI-GeneID:
112294434
NCBI-ProteinID:
XP_024400599
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Position
17:14326550..14333118
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AA seq
722 aa
AA seq
DB search
MSLYVPERERSGGMLDAVIPLNDFHRSKKSHFSQLALAPVPDQDTLEVAWNDNGKIDIQG
QDSQRSKSPWQINCISDWSSGQEAEAGVTPSKPDTPKGGNLLETGGNGSNTAPNPVHNID
VDNDEMVSWLQYPLDDPFCSDFFGEIQEANTQLLRESFTHGSTKTLPRTNFPGASGNDAG
INRETPSDSAMLLGVGRVSGLLPQGGVEAFNKVRSLHSLQQHSSLPRWPQPLTPNSSSGS
SLLATNNLTFTKASAPTLASPSHHMLPPKTQRVAPVLNSQNTPQPSSPGSMNFSHFSRPA
AMVKANLHSLVGINCGPPPSTRVKQQHNSPVVRPIMEACTSTGSSIAESTTAGQGPSGSY
QEVKTQPAVLEREQNNGIEESRWPSAPCPSPTKDSDCVVSEGNFRSTPPDQETCRLSGVT
NGAVLASSDKGASHGTQHPDVQEPTITSSSGGYGTSIEPLQKVRTSNKRKCSEREETECQ
SEDGEDESVDTKHKPITTGRGSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK
TDKASMLDEAIDYLKILQLQLQMMSIRTGMTLPPMVMPPGLQHMQMPQMPQVAAMPSMGM
VQMGLGMGMMEQAAQRRTRMPMQSHTGPPLNVCLANTSSMVDVHDLRYQQPGVLGYNTSM
SRQHQPMQTTKGLDLDKCNAYMLQQHQLLFQQQQLQQHQLHQHQQHLQHHQRAPNMGGGP
LQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctatgtgccagagcgggaaaggagtggcggaatgcttgatgctgttattccg
ttaaatgactttcacagatcaaagaagagccatttctctcaattggcattagcacctgtg
cctgatcaggatactttggaagtggcttggaatgataatggaaaaatagacatccaagga
caagatagtcaaaggagcaaatctccatggcagataaactgcatctcggattggagcagt
ggacaggaagctgaagctggagtgacacccagtaaacctgatactccgaagggtggaaat
ttactggagactggaggaaatggatcaaatacggcacccaatccagtacacaacattgat
gttgataacgacgaaatggtgtcttggttacagtatccactggatgatcccttctgctct
gatttttttggagagattcaagaagccaacacgcagttgttgagagaatcgtttacgcat
ggttccactaagacattgccccgcactaattttcccggagcttcagggaatgatgctgga
attaacagggaaaccccttccgattctgccatgttattaggtgttggccgtgtttcaggt
ttattacctcagggtggagtagaagccttcaacaaagtacgttctctgcactccctacaa
caacattcttctcttcccagatggccacaaccgctcacccccaattcatcaagtggttca
agtttattagcgacaaataatttgacattcacaaaagcatctgcacctacattggcatct
ccctcccatcacatgttgccccctaaaacacagcgtgtagcccccgtccttaattcgcag
aatacacctcaacctagcagtcctggttccatgaatttctctcacttttcgaggccagcg
gcgatggttaaagctaatttgcatagtctggtaggcataaactgtggtccacctcccagt
acacgtgtcaagcagcagcacaactctcctgttgtaaggccgattatggaggcgtgcaca
tcaactggttcttcgattgccgaatccaccacagcagggcagggaccatctgggtcctat
caggaggtgaagacgcaacctgcggttttggagagggaacagaacaatggcattgaggaa
tctagatggccatctgcaccttgtccgtcaccgacaaaggatagtgactgtgttgtttca
gaaggaaattttaggagcacacccccggatcaagaaacttgccggctatcaggtgtgact
aatggtgctgtattagcttcttctgataaaggagcttctcatggtacacaacaccccgat
gtacaggagccaaccatcacttcctcctcaggtggatatgggaccagcattgaaccgctt
caaaaggttagaacaagtaacaaaagaaagtgtagcgaaagagaagagaccgaatgccaa
agtgaagacggcgaagacgagtcggtagacacaaaacataaacctattacaactggtcgt
ggaagtactactaaaagaagcagggctgccgaagtccacaatcagtccgaaagacgtcga
agagacagaatcaacgaaaaaatgagagcactacaggagcttatcccaaactctaacaag
acggacaaggcatccatgctggacgaggcaattgattatctaaaaattcttcagcttcag
ctccagatgatgtcaatcaggacgggtatgactttgccaccaatggttatgcctcctgga
ttacaacacatgcagatgccgcagatgccgcaggtggcagcaatgccgtccatggggatg
gtgcaaatgggacttgggatgggaatgatggagcaggctgcacaaagacgaacaagaatg
cctatgcagtctcatacagggccacctctcaatgtttgtttggcaaacacatcttctatg
gttgatgtacatgacctccgctatcaacagccaggcgttttgggttataataccagcatg
tctcgtcagcatcagccaatgcaaacgaccaagggtctagaccttgacaagtgtaatgct
tatatgttgcagcagcatcaacttctatttcaacagcaacaacttcagcagcaccaactt
catcaacatcaacagcatctgcaacaccaccagcgggctcctaatatgggtggaggtcca
cttcaataa
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